Home » date » 2010 » Dec » 19 »

RP - Depressie - No Cat

*The author of this computation has been verified*
R Software Module: /rwasp_regression_trees1.wasp (opens new window with default values)
Title produced by software: Recursive Partitioning (Regression Trees)
Date of computation: Sun, 19 Dec 2010 16:08:15 +0000
 
Cite this page as follows:
Statistical Computations at FreeStatistics.org, Office for Research Development and Education, URL http://www.freestatistics.org/blog/date/2010/Dec/19/t1292774819cakg31s15qkg6cp.htm/, Retrieved Sun, 19 Dec 2010 17:07:03 +0100
 
BibTeX entries for LaTeX users:
@Manual{KEY,
    author = {{YOUR NAME}},
    publisher = {Office for Research Development and Education},
    title = {Statistical Computations at FreeStatistics.org, URL http://www.freestatistics.org/blog/date/2010/Dec/19/t1292774819cakg31s15qkg6cp.htm/},
    year = {2010},
}
@Manual{R,
    title = {R: A Language and Environment for Statistical Computing},
    author = {{R Development Core Team}},
    organization = {R Foundation for Statistical Computing},
    address = {Vienna, Austria},
    year = {2010},
    note = {{ISBN} 3-900051-07-0},
    url = {http://www.R-project.org},
}
 
Original text written by user:
elly.decuyper@student.lessius.eu
 
IsPrivate?
No (this computation is public)
 
User-defined keywords:
 
Dataseries X:
» Textbox « » Textfile « » CSV «
0 1 4 4 2 0 1 2 2 2 0 1 5 5 4 1 1 4 5 3 0 2 1 1 2 0 1 2 4 1 0 4 5 6 4 0 1 1 5 3 0 1 3 4 1 0 2 5 5 4 1 1 2 7 4 0 1 2 2 4 1 2 2 7 3 0 1 2 5 4 0 1 1 5 1 1 1 4 7 4 1 1 3 3 1 0 1 6 6 4 1 1 1 2 4 0 2 3 6 3 1 1 2 1 2 0 2 5 5 6 0 1 5 4 5 0 2 3 4 4 1 1 3 7 6 0 1 5 7 1 1 1 5 5 2 0 2 4 6 4 1 1 2 5 4 0 1 1 1 1 1 2 4 6 2 0 1 6 4 1 0 1 2 2 2 1 1 3 2 2 1 1 2 6 2 1 2 4 6 6 1 1 2 6 2 0 1 1 1 1 1 1 5 6 4 1 1 5 6 3 0 1 1 1 3 1 1 1 1 1 1 1 2 7 4 0 1 4 2 3 0 1 5 3 4 0 1 3 5 3 0 1 3 3 2 1 1 1 4 1 0 1 2 2 5 1 1 3 3 4 1 2 2 7 1 0 2 5 7 2 1 1 4 5 4 0 1 4 1 3 0 1 2 2 2 0 2 3 5 3 1 1 6 2 3 0 1 2 4 2 1 2 3 7 2 1 1 2 2 4 0 1 5 5 4 0 1 5 6 2 0 1 5 3 2 1 1 6 7 5 0 2 4 4 4 1 1 2 3 5 0 1 5 5 5 1 2 2 3 2 1 1 1 2 3 0 1 6 6 4 0 1 6 6 2 1 1 3 5 2 1 1 4 2 2 0 3 5 3 5 0 2 2 4 2 0 2 4 6 3 1 1 3 5 2 1 1 2 2 2 1 1 2 5 2 1 1 3 2 2 0 1 3 1 2 1 1 7 2 1 0 1 2 4 3 0 1 2 5 3 1 1 2 5 3 0 1 5 3 3 0 1 1 2 1 0 3 5 7 4 0 1 2 1 1 0 1 1 5 1 0 1 2 5 1 0 1 2 2 3 0 1 0 6 2 0 etc...
 
Output produced by software:

Enter (or paste) a matrix (table) containing all data (time) series. Every column represents a different variable and must be delimited by a space or Tab. Every row represents a period in time (or category) and must be delimited by hard returns. The easiest way to enter data is to copy and paste a block of spreadsheet cells. Please, do not use commas or spaces to seperate groups of digits!


Summary of computational transaction
Raw Inputview raw input (R code)
Raw Outputview raw output of R engine
Computing time6 seconds
R Server'Gwilym Jenkins' @ 72.249.127.135


Goodness of Fit
Correlation0.3412
R-squared0.1164
RMSE0.5412


Actuals, Predictions, and Residuals
#ActualsForecastsResiduals
111.11235955056180-0.112359550561798
211.11235955056180-0.112359550561798
311.46428571428571-0.464285714285714
411.11235955056180-0.112359550561798
521.112359550561800.887640449438202
611.11235955056180-0.112359550561798
741.542857142857142.45714285714286
811.11235955056180-0.112359550561798
911.11235955056180-0.112359550561798
1021.464285714285710.535714285714286
1111.54285714285714-0.542857142857143
1211.11235955056180-0.112359550561798
1321.542857142857140.457142857142857
1411.11235955056180-0.112359550561798
1511.11235955056180-0.112359550561798
1611.54285714285714-0.542857142857143
1711.11235955056180-0.112359550561798
1811.54285714285714-0.542857142857143
1911.11235955056180-0.112359550561798
2021.542857142857140.457142857142857
2111.11235955056180-0.112359550561798
2221.464285714285710.535714285714286
2311.46428571428571-0.464285714285714
2421.112359550561800.887640449438202
2511.54285714285714-0.542857142857143
2611.54285714285714-0.542857142857143
2711.46428571428571-0.464285714285714
2821.542857142857140.457142857142857
2911.11235955056180-0.112359550561798
3011.11235955056180-0.112359550561798
3121.542857142857140.457142857142857
3211.46428571428571-0.464285714285714
3311.11235955056180-0.112359550561798
3411.11235955056180-0.112359550561798
3511.54285714285714-0.542857142857143
3621.542857142857140.457142857142857
3711.54285714285714-0.542857142857143
3811.11235955056180-0.112359550561798
3911.54285714285714-0.542857142857143
4011.54285714285714-0.542857142857143
4111.11235955056180-0.112359550561798
4211.11235955056180-0.112359550561798
4311.54285714285714-0.542857142857143
4411.11235955056180-0.112359550561798
4511.46428571428571-0.464285714285714
4611.11235955056180-0.112359550561798
4711.11235955056180-0.112359550561798
4811.11235955056180-0.112359550561798
4911.11235955056180-0.112359550561798
5011.11235955056180-0.112359550561798
5121.542857142857140.457142857142857
5221.542857142857140.457142857142857
5311.11235955056180-0.112359550561798
5411.11235955056180-0.112359550561798
5511.11235955056180-0.112359550561798
5621.112359550561800.887640449438202
5711.46428571428571-0.464285714285714
5811.11235955056180-0.112359550561798
5921.542857142857140.457142857142857
6011.11235955056180-0.112359550561798
6111.46428571428571-0.464285714285714
6211.54285714285714-0.542857142857143
6311.46428571428571-0.464285714285714
6411.54285714285714-0.542857142857143
6521.112359550561800.887640449438202
6611.11235955056180-0.112359550561798
6711.46428571428571-0.464285714285714
6821.112359550561800.887640449438202
6911.11235955056180-0.112359550561798
7011.54285714285714-0.542857142857143
7111.54285714285714-0.542857142857143
7211.11235955056180-0.112359550561798
7311.11235955056180-0.112359550561798
7431.464285714285711.53571428571429
7521.112359550561800.887640449438202
7621.542857142857140.457142857142857
7711.11235955056180-0.112359550561798
7811.11235955056180-0.112359550561798
7911.11235955056180-0.112359550561798
8011.11235955056180-0.112359550561798
8111.11235955056180-0.112359550561798
8211.46428571428571-0.464285714285714
8311.11235955056180-0.112359550561798
8411.11235955056180-0.112359550561798
8511.11235955056180-0.112359550561798
8611.46428571428571-0.464285714285714
8711.11235955056180-0.112359550561798
8831.542857142857141.45714285714286
8911.11235955056180-0.112359550561798
9011.11235955056180-0.112359550561798
9111.11235955056180-0.112359550561798
9211.11235955056180-0.112359550561798
9311.54285714285714-0.542857142857143
9411.46428571428571-0.464285714285714
9511.11235955056180-0.112359550561798
9611.11235955056180-0.112359550561798
9711.11235955056180-0.112359550561798
9811.11235955056180-0.112359550561798
9911.11235955056180-0.112359550561798
10021.112359550561800.887640449438202
10111.54285714285714-0.542857142857143
10211.46428571428571-0.464285714285714
10311.11235955056180-0.112359550561798
10421.542857142857140.457142857142857
10511.11235955056180-0.112359550561798
10621.464285714285710.535714285714286
10721.112359550561800.887640449438202
10831.464285714285711.53571428571429
10921.464285714285710.535714285714286
11021.542857142857140.457142857142857
11111.54285714285714-0.542857142857143
11211.11235955056180-0.112359550561798
11311.11235955056180-0.112359550561798
11411.11235955056180-0.112359550561798
11511.46428571428571-0.464285714285714
11611.11235955056180-0.112359550561798
11711.11235955056180-0.112359550561798
11821.464285714285710.535714285714286
11911.11235955056180-0.112359550561798
12011.54285714285714-0.542857142857143
12111.11235955056180-0.112359550561798
12211.11235955056180-0.112359550561798
12311.46428571428571-0.464285714285714
12411.11235955056180-0.112359550561798
12511.11235955056180-0.112359550561798
12611.11235955056180-0.112359550561798
12711.11235955056180-0.112359550561798
12821.464285714285710.535714285714286
12921.464285714285710.535714285714286
13011.11235955056180-0.112359550561798
13111.11235955056180-0.112359550561798
13211.11235955056180-0.112359550561798
13311.11235955056180-0.112359550561798
13441.542857142857142.45714285714286
13511.46428571428571-0.464285714285714
13621.112359550561800.887640449438202
13711.54285714285714-0.542857142857143
13811.46428571428571-0.464285714285714
13911.11235955056180-0.112359550561798
14011.54285714285714-0.542857142857143
14111.11235955056180-0.112359550561798
14211.11235955056180-0.112359550561798
14311.11235955056180-0.112359550561798
14411.11235955056180-0.112359550561798
14511.54285714285714-0.542857142857143
14611.11235955056180-0.112359550561798
14711.11235955056180-0.112359550561798
14821.112359550561800.887640449438202
14911.46428571428571-0.464285714285714
15011.11235955056180-0.112359550561798
15131.464285714285711.53571428571429
15211.11235955056180-0.112359550561798
 
Charts produced by software:
http://www.freestatistics.org/blog/date/2010/Dec/19/t1292774819cakg31s15qkg6cp/2yrcu1292774888.png (open in new window)
http://www.freestatistics.org/blog/date/2010/Dec/19/t1292774819cakg31s15qkg6cp/2yrcu1292774888.ps (open in new window)


http://www.freestatistics.org/blog/date/2010/Dec/19/t1292774819cakg31s15qkg6cp/391uf1292774888.png (open in new window)
http://www.freestatistics.org/blog/date/2010/Dec/19/t1292774819cakg31s15qkg6cp/391uf1292774888.ps (open in new window)


http://www.freestatistics.org/blog/date/2010/Dec/19/t1292774819cakg31s15qkg6cp/41abz1292774888.png (open in new window)
http://www.freestatistics.org/blog/date/2010/Dec/19/t1292774819cakg31s15qkg6cp/41abz1292774888.ps (open in new window)


 
Parameters (Session):
par1 = 5 ; par2 = quantiles ; par3 = 2 ; par4 = no ;
 
Parameters (R input):
par1 = 2 ; par2 = none ; par3 = 3 ; par4 = no ;
 
R code (references can be found in the software module):
library(party)
library(Hmisc)
par1 <- as.numeric(par1)
par3 <- as.numeric(par3)
x <- data.frame(t(y))
is.data.frame(x)
x <- x[!is.na(x[,par1]),]
k <- length(x[1,])
n <- length(x[,1])
colnames(x)[par1]
x[,par1]
if (par2 == 'kmeans') {
cl <- kmeans(x[,par1], par3)
print(cl)
clm <- matrix(cbind(cl$centers,1:par3),ncol=2)
clm <- clm[sort.list(clm[,1]),]
for (i in 1:par3) {
cl$cluster[cl$cluster==clm[i,2]] <- paste('C',i,sep='')
}
cl$cluster <- as.factor(cl$cluster)
print(cl$cluster)
x[,par1] <- cl$cluster
}
if (par2 == 'quantiles') {
x[,par1] <- cut2(x[,par1],g=par3)
}
if (par2 == 'hclust') {
hc <- hclust(dist(x[,par1])^2, 'cen')
print(hc)
memb <- cutree(hc, k = par3)
dum <- c(mean(x[memb==1,par1]))
for (i in 2:par3) {
dum <- c(dum, mean(x[memb==i,par1]))
}
hcm <- matrix(cbind(dum,1:par3),ncol=2)
hcm <- hcm[sort.list(hcm[,1]),]
for (i in 1:par3) {
memb[memb==hcm[i,2]] <- paste('C',i,sep='')
}
memb <- as.factor(memb)
print(memb)
x[,par1] <- memb
}
if (par2=='equal') {
ed <- cut(as.numeric(x[,par1]),par3,labels=paste('C',1:par3,sep=''))
x[,par1] <- as.factor(ed)
}
table(x[,par1])
colnames(x)
colnames(x)[par1]
x[,par1]
if (par2 == 'none') {
m <- ctree(as.formula(paste(colnames(x)[par1],' ~ .',sep='')),data = x)
}
load(file='createtable')
if (par2 != 'none') {
m <- ctree(as.formula(paste('as.factor(',colnames(x)[par1],') ~ .',sep='')),data = x)
if (par4=='yes') {
a<-table.start()
a<-table.row.start(a)
a<-table.element(a,'10-Fold Cross Validation',3+2*par3,TRUE)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'',1,TRUE)
a<-table.element(a,'Prediction (training)',par3+1,TRUE)
a<-table.element(a,'Prediction (testing)',par3+1,TRUE)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'Actual',1,TRUE)
for (jjj in 1:par3) a<-table.element(a,paste('C',jjj,sep=''),1,TRUE)
a<-table.element(a,'CV',1,TRUE)
for (jjj in 1:par3) a<-table.element(a,paste('C',jjj,sep=''),1,TRUE)
a<-table.element(a,'CV',1,TRUE)
a<-table.row.end(a)
for (i in 1:10) {
ind <- sample(2, nrow(x), replace=T, prob=c(0.9,0.1))
m.ct <- ctree(as.formula(paste('as.factor(',colnames(x)[par1],') ~ .',sep='')),data =x[ind==1,])
if (i==1) {
m.ct.i.pred <- predict(m.ct, newdata=x[ind==1,])
m.ct.i.actu <- x[ind==1,par1]
m.ct.x.pred <- predict(m.ct, newdata=x[ind==2,])
m.ct.x.actu <- x[ind==2,par1]
} else {
m.ct.i.pred <- c(m.ct.i.pred,predict(m.ct, newdata=x[ind==1,]))
m.ct.i.actu <- c(m.ct.i.actu,x[ind==1,par1])
m.ct.x.pred <- c(m.ct.x.pred,predict(m.ct, newdata=x[ind==2,]))
m.ct.x.actu <- c(m.ct.x.actu,x[ind==2,par1])
}
}
print(m.ct.i.tab <- table(m.ct.i.actu,m.ct.i.pred))
numer <- 0
for (i in 1:par3) {
print(m.ct.i.tab[i,i] / sum(m.ct.i.tab[i,]))
numer <- numer + m.ct.i.tab[i,i]
}
print(m.ct.i.cp <- numer / sum(m.ct.i.tab))
print(m.ct.x.tab <- table(m.ct.x.actu,m.ct.x.pred))
numer <- 0
for (i in 1:par3) {
print(m.ct.x.tab[i,i] / sum(m.ct.x.tab[i,]))
numer <- numer + m.ct.x.tab[i,i]
}
print(m.ct.x.cp <- numer / sum(m.ct.x.tab))
for (i in 1:par3) {
a<-table.row.start(a)
a<-table.element(a,paste('C',i,sep=''),1,TRUE)
for (jjj in 1:par3) a<-table.element(a,m.ct.i.tab[i,jjj])
a<-table.element(a,round(m.ct.i.tab[i,i]/sum(m.ct.i.tab[i,]),4))
for (jjj in 1:par3) a<-table.element(a,m.ct.x.tab[i,jjj])
a<-table.element(a,round(m.ct.x.tab[i,i]/sum(m.ct.x.tab[i,]),4))
a<-table.row.end(a)
}
a<-table.row.start(a)
a<-table.element(a,'Overall',1,TRUE)
for (jjj in 1:par3) a<-table.element(a,'-')
a<-table.element(a,round(m.ct.i.cp,4))
for (jjj in 1:par3) a<-table.element(a,'-')
a<-table.element(a,round(m.ct.x.cp,4))
a<-table.row.end(a)
a<-table.end(a)
table.save(a,file='mytable3.tab')
}
}
m
bitmap(file='test1.png')
plot(m)
dev.off()
bitmap(file='test1a.png')
plot(x[,par1] ~ as.factor(where(m)),main='Response by Terminal Node',xlab='Terminal Node',ylab='Response')
dev.off()
if (par2 == 'none') {
forec <- predict(m)
result <- as.data.frame(cbind(x[,par1],forec,x[,par1]-forec))
colnames(result) <- c('Actuals','Forecasts','Residuals')
print(result)
}
if (par2 != 'none') {
print(cbind(as.factor(x[,par1]),predict(m)))
myt <- table(as.factor(x[,par1]),predict(m))
print(myt)
}
bitmap(file='test2.png')
if(par2=='none') {
op <- par(mfrow=c(2,2))
plot(density(result$Actuals),main='Kernel Density Plot of Actuals')
plot(density(result$Residuals),main='Kernel Density Plot of Residuals')
plot(result$Forecasts,result$Actuals,main='Actuals versus Predictions',xlab='Predictions',ylab='Actuals')
plot(density(result$Forecasts),main='Kernel Density Plot of Predictions')
par(op)
}
if(par2!='none') {
plot(myt,main='Confusion Matrix',xlab='Actual',ylab='Predicted')
}
dev.off()
if (par2 == 'none') {
detcoef <- cor(result$Forecasts,result$Actuals)
a<-table.start()
a<-table.row.start(a)
a<-table.element(a,'Goodness of Fit',2,TRUE)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'Correlation',1,TRUE)
a<-table.element(a,round(detcoef,4))
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'R-squared',1,TRUE)
a<-table.element(a,round(detcoef*detcoef,4))
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'RMSE',1,TRUE)
a<-table.element(a,round(sqrt(mean((result$Residuals)^2)),4))
a<-table.row.end(a)
a<-table.end(a)
table.save(a,file='mytable1.tab')
a<-table.start()
a<-table.row.start(a)
a<-table.element(a,'Actuals, Predictions, and Residuals',4,TRUE)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'#',header=TRUE)
a<-table.element(a,'Actuals',header=TRUE)
a<-table.element(a,'Forecasts',header=TRUE)
a<-table.element(a,'Residuals',header=TRUE)
a<-table.row.end(a)
for (i in 1:length(result$Actuals)) {
a<-table.row.start(a)
a<-table.element(a,i,header=TRUE)
a<-table.element(a,result$Actuals[i])
a<-table.element(a,result$Forecasts[i])
a<-table.element(a,result$Residuals[i])
a<-table.row.end(a)
}
a<-table.end(a)
table.save(a,file='mytable.tab')
}
if (par2 != 'none') {
a<-table.start()
a<-table.row.start(a)
a<-table.element(a,'Confusion Matrix (predicted in columns / actuals in rows)',par3+1,TRUE)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'',1,TRUE)
for (i in 1:par3) {
a<-table.element(a,paste('C',i,sep=''),1,TRUE)
}
a<-table.row.end(a)
for (i in 1:par3) {
a<-table.row.start(a)
a<-table.element(a,paste('C',i,sep=''),1,TRUE)
for (j in 1:par3) {
a<-table.element(a,myt[i,j])
}
a<-table.row.end(a)
}
a<-table.end(a)
table.save(a,file='mytable2.tab')
}
 





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Disclaimer

Information provided on this web site is provided "AS IS" without warranty of any kind, either express or implied, including, without limitation, warranties of merchantability, fitness for a particular purpose, and noninfringement. We use reasonable efforts to include accurate and timely information and periodically update the information, and software without notice. However, we make no warranties or representations as to the accuracy or completeness of such information (or software), and we assume no liability or responsibility for errors or omissions in the content of this web site, or any software bugs in online applications. Your use of this web site is AT YOUR OWN RISK. Under no circumstances and under no legal theory shall we be liable to you or any other person for any direct, indirect, special, incidental, exemplary, or consequential damages arising from your access to, or use of, this web site.


Privacy Policy

We may request personal information to be submitted to our servers in order to be able to:

  • personalize online software applications according to your needs
  • enforce strict security rules with respect to the data that you upload (e.g. statistical data)
  • manage user sessions of online applications
  • alert you about important changes or upgrades in resources or applications

We NEVER allow other companies to directly offer registered users information about their products and services. Banner references and hyperlinks of third parties NEVER contain any personal data of the visitor.

We do NOT sell, nor transmit by any means, personal information, nor statistical data series uploaded by you to third parties.

We carefully protect your data from loss, misuse, alteration, and destruction. However, at any time, and under any circumstance you are solely responsible for managing your passwords, and keeping them secret.

We store a unique ANONYMOUS USER ID in the form of a small 'Cookie' on your computer. This allows us to track your progress when using this website which is necessary to create state-dependent features. The cookie is used for NO OTHER PURPOSE. At any time you may opt to disallow cookies from this website - this will not affect other features of this website.

We examine cookies that are used by third-parties (banner and online ads) very closely: abuse from third-parties automatically results in termination of the advertising contract without refund. We have very good reason to believe that the cookies that are produced by third parties (banner ads) do NOT cause any privacy or security risk.

FreeStatistics.org is safe. There is no need to download any software to use the applications and services contained in this website. Hence, your system's security is not compromised by their use, and your personal data - other than data you submit in the account application form, and the user-agent information that is transmitted by your browser - is never transmitted to our servers.

As a general rule, we do not log on-line behavior of individuals (other than normal logging of webserver 'hits'). However, in cases of abuse, hacking, unauthorized access, Denial of Service attacks, illegal copying, hotlinking, non-compliance with international webstandards (such as robots.txt), or any other harmful behavior, our system engineers are empowered to log, track, identify, publish, and ban misbehaving individuals - even if this leads to ban entire blocks of IP addresses, or disclosing user's identity.


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