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Description of Statistical Computation

Author's title

Author*The author of this computation has been verified*
R Software Modulerwasp_twosampletests_mean.wasp
Title produced by softwarePaired and Unpaired Two Samples Tests about the Mean
Date of computationWed, 04 Nov 2015 19:45:25 +0000
Cite this page as followsStatistical Computations at FreeStatistics.org, Office for Research Development and Education, URL https://freestatistics.org/blog/index.php?v=date/2015/Nov/04/t1446666681t3wu48cip77eol4.htm/, Retrieved Tue, 14 May 2024 07:38:43 +0000
Statistical Computations at FreeStatistics.org, Office for Research Development and Education, URL https://freestatistics.org/blog/index.php?pk=283160, Retrieved Tue, 14 May 2024 07:38:43 +0000
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Original text written by user:
IsPrivate?No (this computation is public)
User-defined keywords
Estimated Impact550

Tree of Dependent Computations

Family? (F = Feedback message, R = changed R code, M = changed R Module, P = changed Parameters, D = changed Data)
-       [Paired and Unpaired Two Samples Tests about the Mean] [] [2015-11-04 19:45:25] [63a9f0ea7bb98050796b649e85481845] [Current]
- R PD    [Paired and Unpaired Two Samples Tests about the Mean] [Wilcoxon test] [2015-12-07 19:06:07] [22b6f4a061c8797aa483199554a73d13]
-           [Paired and Unpaired Two Samples Tests about the Mean] [Wilcoxon test] [2015-12-07 19:26:40] [22b6f4a061c8797aa483199554a73d13]
-   P         [Paired and Unpaired Two Samples Tests about the Mean] [wilcoxon test ] [2015-12-14 13:13:43] [22b6f4a061c8797aa483199554a73d13]
-               [Paired and Unpaired Two Samples Tests about the Mean] [] [2015-12-17 19:46:27] [22b6f4a061c8797aa483199554a73d13]
- R PD    [Paired and Unpaired Two Samples Tests about the Mean] [] [2015-12-16 10:27:29] [23dea497e8c7f4d7527c256c4e83e065]
- R PD    [Paired and Unpaired Two Samples Tests about the Mean] [] [2015-12-16 10:32:22] [23dea497e8c7f4d7527c256c4e83e065]
- RMPD    [Multiple Regression] [] [2016-01-10 15:02:48] [36781f05c04c55e165b348994b753b95]
- RMPD    [Notched Boxplots] [] [2016-01-10 15:35:33] [36781f05c04c55e165b348994b753b95]
- RMPD    [Notched Boxplots] [] [2016-01-10 15:38:50] [36781f05c04c55e165b348994b753b95]
- RMPD    [Notched Boxplots] [] [2016-01-10 15:40:38] [36781f05c04c55e165b348994b753b95]
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Dataset

Dataseries X:
Download CSV
Histogram
Boxplots 
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Tables (Output of Computation)





Summary of computational transaction
Raw Inputview raw input (R code)
Raw Outputview raw output of R engine
Computing time2 seconds
R Server'Gwilym Jenkins' @ jenkins.wessa.net

\begin{tabular}{lllllllll}
\hline
Summary of computational transaction \tabularnewline
Raw Input & view raw input (R code)  \tabularnewline
Raw Output & view raw output of R engine  \tabularnewline
Computing time & 2 seconds \tabularnewline
R Server & 'Gwilym Jenkins' @ jenkins.wessa.net \tabularnewline
\hline
\end{tabular}
%Source: https://freestatistics.org/blog/index.php?pk=283160&T=0

[TABLE]
[ROW][C]Summary of computational transaction[/C][/ROW]
[ROW][C]Raw Input[/C][C]view raw input (R code) [/C][/ROW]
[ROW][C]Raw Output[/C][C]view raw output of R engine [/C][/ROW]
[ROW][C]Computing time[/C][C]2 seconds[/C][/ROW]
[ROW][C]R Server[/C][C]'Gwilym Jenkins' @ jenkins.wessa.net[/C][/ROW]
[/TABLE]
Source: https://freestatistics.org/blog/index.php?pk=283160&T=0

Globally Unique Identifier (entire table): ba.freestatistics.org/blog/index.php?pk=283160&T=0

As an alternative you can also use a QR Code:  
QR Code


The GUIDs for individual cells are displayed in the table below:

Summary of computational transaction
Raw Inputview raw input (R code)
Raw Outputview raw output of R engine
Computing time2 seconds
R Server'Gwilym Jenkins' @ jenkins.wessa.net






Two Sample t-test (unpaired)
Mean of Sample 17.64705882352941
Mean of Sample 210.1639344262295
t-stat-4.53434761447889
df239
p-value9.14269910410163e-06
H0 value0
Alternativetwo.sided
CI Level0.99
CI[-3.95814334158997,-1.07560786381022]
F-test to compare two variances
F-stat1.61191530912547
df118
p-value0.00945958302412553
H0 value1
Alternativetwo.sided
CI Level0.99
CI[1.00356033099448,2.59222051275117]

\begin{tabular}{lllllllll}
\hline
Two Sample t-test (unpaired) \tabularnewline
Mean of Sample 1 & 7.64705882352941 \tabularnewline
Mean of Sample 2 & 10.1639344262295 \tabularnewline
t-stat & -4.53434761447889 \tabularnewline
df & 239 \tabularnewline
p-value & 9.14269910410163e-06 \tabularnewline
H0 value & 0 \tabularnewline
Alternative & two.sided \tabularnewline
CI Level & 0.99 \tabularnewline
CI & [-3.95814334158997,-1.07560786381022] \tabularnewline
F-test to compare two variances \tabularnewline
F-stat & 1.61191530912547 \tabularnewline
df & 118 \tabularnewline
p-value & 0.00945958302412553 \tabularnewline
H0 value & 1 \tabularnewline
Alternative & two.sided \tabularnewline
CI Level & 0.99 \tabularnewline
CI & [1.00356033099448,2.59222051275117] \tabularnewline
\hline
\end{tabular}
%Source: https://freestatistics.org/blog/index.php?pk=283160&T=1

[TABLE]
[ROW][C]Two Sample t-test (unpaired)[/C][/ROW]
[ROW][C]Mean of Sample 1[/C][C]7.64705882352941[/C][/ROW]
[ROW][C]Mean of Sample 2[/C][C]10.1639344262295[/C][/ROW]
[ROW][C]t-stat[/C][C]-4.53434761447889[/C][/ROW]
[ROW][C]df[/C][C]239[/C][/ROW]
[ROW][C]p-value[/C][C]9.14269910410163e-06[/C][/ROW]
[ROW][C]H0 value[/C][C]0[/C][/ROW]
[ROW][C]Alternative[/C][C]two.sided[/C][/ROW]
[ROW][C]CI Level[/C][C]0.99[/C][/ROW]
[ROW][C]CI[/C][C][-3.95814334158997,-1.07560786381022][/C][/ROW]
[ROW][C]F-test to compare two variances[/C][/ROW]
[ROW][C]F-stat[/C][C]1.61191530912547[/C][/ROW]
[ROW][C]df[/C][C]118[/C][/ROW]
[ROW][C]p-value[/C][C]0.00945958302412553[/C][/ROW]
[ROW][C]H0 value[/C][C]1[/C][/ROW]
[ROW][C]Alternative[/C][C]two.sided[/C][/ROW]
[ROW][C]CI Level[/C][C]0.99[/C][/ROW]
[ROW][C]CI[/C][C][1.00356033099448,2.59222051275117][/C][/ROW]
[/TABLE]
Source: https://freestatistics.org/blog/index.php?pk=283160&T=1

Globally Unique Identifier (entire table): ba.freestatistics.org/blog/index.php?pk=283160&T=1

As an alternative you can also use a QR Code:  
QR Code


The GUIDs for individual cells are displayed in the table below:

Two Sample t-test (unpaired)
Mean of Sample 17.64705882352941
Mean of Sample 210.1639344262295
t-stat-4.53434761447889
df239
p-value9.14269910410163e-06
H0 value0
Alternativetwo.sided
CI Level0.99
CI[-3.95814334158997,-1.07560786381022]
F-test to compare two variances
F-stat1.61191530912547
df118
p-value0.00945958302412553
H0 value1
Alternativetwo.sided
CI Level0.99
CI[1.00356033099448,2.59222051275117]






Welch Two Sample t-test (unpaired)
Mean of Sample 17.64705882352941
Mean of Sample 210.1639344262295
t-stat-4.52108786386424
df224.020946504016
p-value9.96802439134885e-06
H0 value0
Alternativetwo.sided
CI Level0.99
CI[-3.96314812689283,-1.07060307850736]

\begin{tabular}{lllllllll}
\hline
Welch Two Sample t-test (unpaired) \tabularnewline
Mean of Sample 1 & 7.64705882352941 \tabularnewline
Mean of Sample 2 & 10.1639344262295 \tabularnewline
t-stat & -4.52108786386424 \tabularnewline
df & 224.020946504016 \tabularnewline
p-value & 9.96802439134885e-06 \tabularnewline
H0 value & 0 \tabularnewline
Alternative & two.sided \tabularnewline
CI Level & 0.99 \tabularnewline
CI & [-3.96314812689283,-1.07060307850736] \tabularnewline
\hline
\end{tabular}
%Source: https://freestatistics.org/blog/index.php?pk=283160&T=2

[TABLE]
[ROW][C]Welch Two Sample t-test (unpaired)[/C][/ROW]
[ROW][C]Mean of Sample 1[/C][C]7.64705882352941[/C][/ROW]
[ROW][C]Mean of Sample 2[/C][C]10.1639344262295[/C][/ROW]
[ROW][C]t-stat[/C][C]-4.52108786386424[/C][/ROW]
[ROW][C]df[/C][C]224.020946504016[/C][/ROW]
[ROW][C]p-value[/C][C]9.96802439134885e-06[/C][/ROW]
[ROW][C]H0 value[/C][C]0[/C][/ROW]
[ROW][C]Alternative[/C][C]two.sided[/C][/ROW]
[ROW][C]CI Level[/C][C]0.99[/C][/ROW]
[ROW][C]CI[/C][C][-3.96314812689283,-1.07060307850736][/C][/ROW]
[/TABLE]
Source: https://freestatistics.org/blog/index.php?pk=283160&T=2

Globally Unique Identifier (entire table): ba.freestatistics.org/blog/index.php?pk=283160&T=2

As an alternative you can also use a QR Code:  
QR Code


The GUIDs for individual cells are displayed in the table below:

Welch Two Sample t-test (unpaired)
Mean of Sample 17.64705882352941
Mean of Sample 210.1639344262295
t-stat-4.52108786386424
df224.020946504016
p-value9.96802439134885e-06
H0 value0
Alternativetwo.sided
CI Level0.99
CI[-3.96314812689283,-1.07060307850736]






Wilcoxon Rank-Sum Test (Mann–Whitney U test) with continuity correction (unpaired)
W5078
p-value5.31223764676261e-05
H0 value0
Alternativetwo.sided
Kolmogorov-Smirnov Test to compare Distributions of two Samples
KS Statistic0.29294668687147
p-value6.46649874186389e-05
Kolmogorov-Smirnov Test to compare Distributional Shape of two Samples
KS Statistic0.155599944895991
p-value0.108172742457023

\begin{tabular}{lllllllll}
\hline
Wilcoxon Rank-Sum Test (Mann–Whitney U test) with continuity correction (unpaired) \tabularnewline
W & 5078 \tabularnewline
p-value & 5.31223764676261e-05 \tabularnewline
H0 value & 0 \tabularnewline
Alternative & two.sided \tabularnewline
Kolmogorov-Smirnov Test to compare Distributions of two Samples \tabularnewline
KS Statistic & 0.29294668687147 \tabularnewline
p-value & 6.46649874186389e-05 \tabularnewline
Kolmogorov-Smirnov Test to compare Distributional Shape of two Samples \tabularnewline
KS Statistic & 0.155599944895991 \tabularnewline
p-value & 0.108172742457023 \tabularnewline
\hline
\end{tabular}
%Source: https://freestatistics.org/blog/index.php?pk=283160&T=3

[TABLE]
[ROW][C]Wilcoxon Rank-Sum Test (Mann–Whitney U test) with continuity correction (unpaired)[/C][/ROW]
[ROW][C]W[/C][C]5078[/C][/ROW]
[ROW][C]p-value[/C][C]5.31223764676261e-05[/C][/ROW]
[ROW][C]H0 value[/C][C]0[/C][/ROW]
[ROW][C]Alternative[/C][C]two.sided[/C][/ROW]
[ROW][C]Kolmogorov-Smirnov Test to compare Distributions of two Samples[/C][/ROW]
[ROW][C]KS Statistic[/C][C]0.29294668687147[/C][/ROW]
[ROW][C]p-value[/C][C]6.46649874186389e-05[/C][/ROW]
[ROW][C]Kolmogorov-Smirnov Test to compare Distributional Shape of two Samples[/C][/ROW]
[ROW][C]KS Statistic[/C][C]0.155599944895991[/C][/ROW]
[ROW][C]p-value[/C][C]0.108172742457023[/C][/ROW]
[/TABLE]
Source: https://freestatistics.org/blog/index.php?pk=283160&T=3

Globally Unique Identifier (entire table): ba.freestatistics.org/blog/index.php?pk=283160&T=3

As an alternative you can also use a QR Code:  
QR Code


The GUIDs for individual cells are displayed in the table below:

Wilcoxon Rank-Sum Test (Mann–Whitney U test) with continuity correction (unpaired)
W5078
p-value5.31223764676261e-05
H0 value0
Alternativetwo.sided
Kolmogorov-Smirnov Test to compare Distributions of two Samples
KS Statistic0.29294668687147
p-value6.46649874186389e-05
Kolmogorov-Smirnov Test to compare Distributional Shape of two Samples
KS Statistic0.155599944895991
p-value0.108172742457023


Figures (Output of Computation)

Input Parameters & R Code

Parameters (Session):
par1 = 1 ; par2 = 2 ; par3 = 0.99 ; par4 = two.sided ; par5 = unpaired ; par6 = 0 ;
Parameters (R input):
par1 = 1 ; par2 = 2 ; par3 = 0.99 ; par4 = two.sided ; par5 = unpaired ; par6 = 0 ;
R code (references can be found in the software module):
par6 <- '100'
par5 <- 'unpaired'
par4 <- 'two.sided'
par3 <- '0.99'
par2 <- '2'
par1 <- '1'
par1 <- as.numeric(par1) #column number of first sample
par2 <- as.numeric(par2) #column number of second sample
par3 <- as.numeric(par3) #confidence (= 1 - alpha)
if (par5 == 'unpaired') paired <- FALSE else paired <- TRUE
par6 <- as.numeric(par6) #H0
z <- t(y)
if (par1 == par2) stop('Please, select two different column numbers')
if (par1 < 1) stop('Please, select a column number greater than zero for the first sample')
if (par2 < 1) stop('Please, select a column number greater than zero for the second sample')
if (par1 > length(z[1,])) stop('The column number for the first sample should be smaller')
if (par2 > length(z[1,])) stop('The column number for the second sample should be smaller')
if (par3 <= 0) stop('The confidence level should be larger than zero')
if (par3 >= 1) stop('The confidence level should be smaller than zero')
(r.t <- t.test(z[,par1],z[,par2],var.equal=TRUE,alternative=par4,paired=paired,mu=par6,conf.level=par3))
(v.t <- var.test(z[,par1],z[,par2],conf.level=par3))
(r.w <- t.test(z[,par1],z[,par2],var.equal=FALSE,alternative=par4,paired=paired,mu=par6,conf.level=par3))
(w.t <- wilcox.test(z[,par1],z[,par2],alternative=par4,paired=paired,mu=par6,conf.level=par3))
(ks.t <- ks.test(z[,par1],z[,par2],alternative=par4))
m1 <- mean(z[,par1],na.rm=T)
m2 <- mean(z[,par2],na.rm=T)
mdiff <- m1 - m2
newsam1 <- z[!is.na(z[,par1]),par1]
newsam2 <- z[,par2]+mdiff
newsam2 <- newsam2[!is.na(newsam2)]
(ks1.t <- ks.test(newsam1,newsam2,alternative=par4))
mydf <- data.frame(cbind(z[,par1],z[,par2]))
colnames(mydf) <- c('Variable 1','Variable 2')
bitmap(file='test1.png')
boxplot(mydf, notch=TRUE, ylab='value',main=main)
dev.off()
bitmap(file='test2.png')
qqnorm(z[,par1],main='Normal QQplot - Variable 1')
qqline(z[,par1])
dev.off()
bitmap(file='test3.png')
qqnorm(z[,par2],main='Normal QQplot - Variable 2')
qqline(z[,par2])
dev.off()
load(file='createtable')
a<-table.start()
a<-table.row.start(a)
a<-table.element(a,paste('Two Sample t-test (',par5,')',sep=''),2,TRUE)
a<-table.row.end(a)
if(!paired){
a<-table.row.start(a)
a<-table.element(a,'Mean of Sample 1',header=TRUE)
a<-table.element(a,r.t$estimate[[1]])
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'Mean of Sample 2',header=TRUE)
a<-table.element(a,r.t$estimate[[2]])
a<-table.row.end(a)
} else {
a<-table.row.start(a)
a<-table.element(a,'Difference: Mean1 - Mean2',header=TRUE)
a<-table.element(a,r.t$estimate)
a<-table.row.end(a)
}
a<-table.row.start(a)
a<-table.element(a,'t-stat',header=TRUE)
a<-table.element(a,r.t$statistic[[1]])
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'df',header=TRUE)
a<-table.element(a,r.t$parameter[[1]])
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'p-value',header=TRUE)
a<-table.element(a,r.t$p.value)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'H0 value',header=TRUE)
a<-table.element(a,r.t$null.value[[1]])
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'Alternative',header=TRUE)
a<-table.element(a,r.t$alternative)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'CI Level',header=TRUE)
a<-table.element(a,attr(r.t$conf.int,'conf.level'))
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'CI',header=TRUE)
a<-table.element(a,paste('[',r.t$conf.int[1],',',r.t$conf.int[2],']',sep=''))
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'F-test to compare two variances',2,TRUE)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'F-stat',header=TRUE)
a<-table.element(a,v.t$statistic[[1]])
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'df',header=TRUE)
a<-table.element(a,v.t$parameter[[1]])
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'p-value',header=TRUE)
a<-table.element(a,v.t$p.value)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'H0 value',header=TRUE)
a<-table.element(a,v.t$null.value[[1]])
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'Alternative',header=TRUE)
a<-table.element(a,v.t$alternative)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'CI Level',header=TRUE)
a<-table.element(a,attr(v.t$conf.int,'conf.level'))
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'CI',header=TRUE)
a<-table.element(a,paste('[',v.t$conf.int[1],',',v.t$conf.int[2],']',sep=''))
a<-table.row.end(a)
a<-table.end(a)
table.save(a,file='mytable.tab')
a<-table.start()
a<-table.row.start(a)
a<-table.element(a,paste('Welch Two Sample t-test (',par5,')',sep=''),2,TRUE)
a<-table.row.end(a)
if(!paired){
a<-table.row.start(a)
a<-table.element(a,'Mean of Sample 1',header=TRUE)
a<-table.element(a,r.w$estimate[[1]])
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'Mean of Sample 2',header=TRUE)
a<-table.element(a,r.w$estimate[[2]])
a<-table.row.end(a)
} else {
a<-table.row.start(a)
a<-table.element(a,'Difference: Mean1 - Mean2',header=TRUE)
a<-table.element(a,r.w$estimate)
a<-table.row.end(a)
}
a<-table.row.start(a)
a<-table.element(a,'t-stat',header=TRUE)
a<-table.element(a,r.w$statistic[[1]])
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'df',header=TRUE)
a<-table.element(a,r.w$parameter[[1]])
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'p-value',header=TRUE)
a<-table.element(a,r.w$p.value)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'H0 value',header=TRUE)
a<-table.element(a,r.w$null.value[[1]])
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'Alternative',header=TRUE)
a<-table.element(a,r.w$alternative)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'CI Level',header=TRUE)
a<-table.element(a,attr(r.w$conf.int,'conf.level'))
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'CI',header=TRUE)
a<-table.element(a,paste('[',r.w$conf.int[1],',',r.w$conf.int[2],']',sep=''))
a<-table.row.end(a)
a<-table.end(a)
table.save(a,file='mytable1.tab')
a<-table.start()
a<-table.row.start(a)
myWlabel <- 'Wilcoxon Signed-Rank Test'
if (par5=='unpaired') myWlabel = 'Wilcoxon Rank-Sum Test (Mann–Whitney U test)'
a<-table.element(a,paste(myWlabel,' with continuity correction (',par5,')',sep=''),2,TRUE)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'W',header=TRUE)
a<-table.element(a,w.t$statistic[[1]])
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'p-value',header=TRUE)
a<-table.element(a,w.t$p.value)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'H0 value',header=TRUE)
a<-table.element(a,w.t$null.value[[1]])
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'Alternative',header=TRUE)
a<-table.element(a,w.t$alternative)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'Kolmogorov-Smirnov Test to compare Distributions of two Samples',2,TRUE)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'KS Statistic',header=TRUE)
a<-table.element(a,ks.t$statistic[[1]])
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'p-value',header=TRUE)
a<-table.element(a,ks.t$p.value)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'Kolmogorov-Smirnov Test to compare Distributional Shape of two Samples',2,TRUE)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'KS Statistic',header=TRUE)
a<-table.element(a,ks1.t$statistic[[1]])
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'p-value',header=TRUE)
a<-table.element(a,ks1.t$p.value)
a<-table.row.end(a)
a<-table.end(a)
table.save(a,file='mytable2.tab')