Last updated on 2026-04-09 05:52:12 CEST.
| Package | ERROR | OK |
|---|---|---|
| mapi | 3 | 11 |
Current CRAN status: ERROR: 3, OK: 11
Version: 1.1.4
Check: tests
Result: ERROR
Running 'testthat.R' [77s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Attaching package: 'data.table'
The following object is masked from 'package:base':
%notin%
Linking to GEOS 3.14.1, GDAL 3.12.1, PROJ 9.7.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.930, system: 0.190, elapsed: 2.100 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 12.080, system: 0.040, elapsed: 12.130 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.380, system: 0.000, elapsed: 0.360 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.270, system: 1.080, elapsed: 8.270 seconds]
Computing values for grid cells...
... done. [user: 0.140, system: 0.000, elapsed: 0.140 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 22.610, system: 1.330, elapsed: 23.820 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 2.170, system: 0.080, elapsed: 2.230 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 12.500, system: 0.010, elapsed: 12.530 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.290, system: 0.010, elapsed: 0.300 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.710, system: 1.130, elapsed: 7.590 seconds]
Computing values for grid cells...
... done. [user: 0.160, system: 0.000, elapsed: 0.160 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 22.670, system: 1.330, elapsed: 23.770 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 2.150, system: 0.050, elapsed: 2.200 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 12.090, system: 0.060, elapsed: 12.160 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.420, system: 0.000, elapsed: 0.420 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.440, system: 1.400, elapsed: 7.640 seconds]
Computing values for grid cells...
... done. [user: 0.170, system: 0.010, elapsed: 0.180 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
... computing probabilities from permuted values ...
... done. [user: 0.510, system: 0.130, elapsed: 1.790 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 22.790, system: 1.690, elapsed: 25.450 seconds]
Building local cartesian grid...
Flavor: r-devel-windows-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [101s/511s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.529, system: 0.046, elapsed: 2.402 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.638, system: 0.074, elapsed: 16.443 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.218, system: 0.022, elapsed: 0.883 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.987, system: 0.928, elapsed: 100.529 seconds]
Computing values for grid cells...
... done. [user: 0.178, system: 0.009, elapsed: 0.401 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.155, system: 1.151, elapsed: 121.756 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.670, system: 0.064, elapsed: 3.895 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.890, system: 0.161, elapsed: 19.445 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.223, system: 0.018, elapsed: 0.889 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.185, system: 0.900, elapsed: 147.225 seconds]
Computing values for grid cells...
... done. [user: 0.181, system: 0.006, elapsed: 0.352 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.751, system: 1.187, elapsed: 173.017 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.538, system: 0.035, elapsed: 3.311 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.627, system: 0.078, elapsed: 15.960 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.222, system: 0.015, elapsed: 0.643 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.870, system: 0.752, elapsed: 66.095 seconds]
Computing values for grid cells...
... done. [user: 0.171, system: 0.003, elapsed: 0.254 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.295, system: 0.261, elapsed: 1.450 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.432, system: 1.185, elapsed: 88.900 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.612, system: 0.037, elapsed: 2.867 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.574, system: 0.069, elapsed: 16.107 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.222, system: 0.018, elapsed: 0.576 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.065, system: 0.769, elapsed: 60.992 seconds]
Computing values for grid cells...
... done. [user: 0.186, system: 0.004, elapsed: 0.295 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.599, system: 0.610, elapsed: 35.286 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 31.037, system: 1.536, elapsed: 117.337 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [101s/548s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.673, system: 0.050, elapsed: 2.597 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.626, system: 0.065, elapsed: 14.242 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.218, system: 0.020, elapsed: 0.798 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.748, system: 0.813, elapsed: 83.275 seconds]
Computing values for grid cells...
... done. [user: 0.162, system: 0.003, elapsed: 0.182 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.027, system: 0.975, elapsed: 101.963 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.621, system: 0.036, elapsed: 2.222 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.709, system: 0.088, elapsed: 19.962 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.218, system: 0.018, elapsed: 1.073 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.004, system: 0.998, elapsed: 159.505 seconds]
Computing values for grid cells...
... done. [user: 0.189, system: 0.011, elapsed: 0.390 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.352, system: 1.182, elapsed: 184.189 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.643, system: 0.046, elapsed: 3.486 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.666, system: 0.134, elapsed: 21.527 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.225, system: 0.019, elapsed: 1.169 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.009, system: 0.861, elapsed: 64.755 seconds]
Computing values for grid cells...
... done. [user: 0.178, system: 0.007, elapsed: 0.188 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
2 1 3 4
... computing probabilities from permuted values ...
... done. [user: 1.231, system: 0.314, elapsed: 1.223 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.796, system: 1.448, elapsed: 93.720 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.679, system: 0.055, elapsed: 2.906 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.871, system: 0.123, elapsed: 16.767 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.219, system: 0.018, elapsed: 0.764 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.789, system: 0.822, elapsed: 92.115 seconds]
Computing values for grid cells...
... done. [user: 0.172, system: 0.004, elapsed: 0.190 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.680, system: 0.691, elapsed: 45.087 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 31.153, system: 1.743, elapsed: 158.952 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64