Last updated on 2025-10-12 05:50:02 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.21 | 256.80 | 270.01 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.38 | 272.12 | 282.50 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 318.39 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 352.72 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 21.00 | 186.00 | 207.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.65 | 265.06 | 280.71 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.76 | 265.07 | 279.83 | OK | |
| r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 195.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 189.00 | 210.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 177.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 23.00 | 235.00 | 258.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [82s/142s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.490, system: 0.043, elapsed: 1.818 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.016, system: 0.169, elapsed: 12.561 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.183, system: 0.015, elapsed: 0.423 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.952, system: 0.250, elapsed: 9.381 seconds]
Computing values for grid cells...
... done. [user: 0.174, system: 0.007, elapsed: 0.287 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.352, system: 0.509, elapsed: 25.438 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.635, system: 0.070, elapsed: 3.037 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.216, system: 0.222, elapsed: 16.895 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.189, system: 0.016, elapsed: 0.291 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.964, system: 0.259, elapsed: 6.558 seconds]
Computing values for grid cells...
... done. [user: 0.165, system: 0.006, elapsed: 0.273 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.717, system: 0.600, elapsed: 27.844 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.731, system: 0.074, elapsed: 2.735 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.316, system: 0.271, elapsed: 13.864 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.191, system: 0.017, elapsed: 0.285 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.969, system: 0.309, elapsed: 6.042 seconds]
Computing values for grid cells...
... done. [user: 0.173, system: 0.010, elapsed: 0.272 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.172, system: 0.243, elapsed: 1.029 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.179, system: 0.965, elapsed: 25.308 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.743, system: 0.092, elapsed: 2.830 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.251, system: 0.273, elapsed: 14.232 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.189, system: 0.014, elapsed: 0.404 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.794, system: 0.191, elapsed: 6.768 seconds]
Computing values for grid cells...
... done. [user: 0.176, system: 0.004, elapsed: 0.330 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.231, system: 0.441, elapsed: 28.413 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 26.036, system: 1.060, elapsed: 54.603 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [80s/121s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.519, system: 0.039, elapsed: 2.059 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.810, system: 0.121, elapsed: 10.012 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.184, system: 0.013, elapsed: 0.204 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.741, system: 0.253, elapsed: 5.894 seconds]
Computing values for grid cells...
... done. [user: 0.173, system: 0.014, elapsed: 0.256 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.964, system: 0.467, elapsed: 19.132 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.701, system: 0.076, elapsed: 2.464 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.065, system: 0.266, elapsed: 11.874 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.178, system: 0.013, elapsed: 0.202 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.699, system: 0.235, elapsed: 4.702 seconds]
Computing values for grid cells...
... done. [user: 0.167, system: 0.007, elapsed: 0.259 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.331, system: 0.638, elapsed: 20.194 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.678, system: 0.069, elapsed: 2.833 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.120, system: 0.200, elapsed: 16.679 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.183, system: 0.014, elapsed: 0.263 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.604, system: 0.236, elapsed: 4.891 seconds]
Computing values for grid cells...
... done. [user: 0.177, system: 0.016, elapsed: 0.270 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.066, system: 0.256, elapsed: 0.951 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.449, system: 0.835, elapsed: 26.822 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.692, system: 0.081, elapsed: 2.504 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.161, system: 0.312, elapsed: 15.340 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.182, system: 0.010, elapsed: 0.519 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.499, system: 0.162, elapsed: 8.955 seconds]
Computing values for grid cells...
... done. [user: 0.168, system: 0.003, elapsed: 0.305 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 9.997, system: 0.455, elapsed: 18.470 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.325, system: 1.058, elapsed: 47.361 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64