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Description of Statistical Computation

Author's title

Author*The author of this computation has been verified*
R Software Modulerwasp_chi_squared_tests.wasp
Title produced by softwareChi-Squared and McNemar Tests
Date of computationThu, 11 Nov 2010 11:54:28 +0000
Cite this page as followsStatistical Computations at FreeStatistics.org, Office for Research Development and Education, URL https://freestatistics.org/blog/index.php?v=date/2010/Nov/11/t1289476398r0zdqryn8pvx67v.htm/, Retrieved Sun, 11 May 2025 11:05:58 +0000
Statistical Computations at FreeStatistics.org, Office for Research Development and Education, URL https://freestatistics.org/blog/index.php?pk=93203, Retrieved Sun, 11 May 2025 11:05:58 +0000
QR Codes:

Original text written by user:
IsPrivate?No (this computation is public)
User-defined keywords
Estimated Impact354

Tree of Dependent Computations

Family? (F = Feedback message, R = changed R code, M = changed R Module, P = changed Parameters, D = changed Data)
-     [ECEL 2008] [ECEL2008 hypothes...] [2008-06-14 21:17:24] [74be16979710d4c4e7c6647856088456]
F RMPD    [Chi-Squared and McNemar Tests] [Happiness versus ...] [2010-11-11 11:54:28] [b6992a7b26e556359948e164e4227eba] [Current]
-   P       [Chi-Squared and McNemar Tests] [ws 6 deel 1 vraag 1] [2010-11-14 08:08:54] [05ab9592748364013445d860bb938e43]
-           [Chi-Squared and McNemar Tests] [Q1 Happiness vs. ...] [2010-11-14 21:13:30] [2843717cd92615903379c14ebee3c5df]
F   P         [Chi-Squared and McNemar Tests] [Chi-Squared Tests...] [2010-11-15 10:22:14] [6ca0fc48dd5333d51a15728999009c83]
F   P           [Chi-Squared and McNemar Tests] [Chi-Squared Tests...] [2010-11-15 14:04:03] [6ca0fc48dd5333d51a15728999009c83]
F   P           [Chi-Squared and McNemar Tests] [Chi-Squared Tests...] [2010-11-15 14:06:11] [6ca0fc48dd5333d51a15728999009c83]
F   P           [Chi-Squared and McNemar Tests] [Chi-Squared Tests...] [2010-11-15 14:08:00] [6ca0fc48dd5333d51a15728999009c83]
F   P           [Chi-Squared and McNemar Tests] [Chi-Squared Tests...] [2010-11-15 14:10:11] [6ca0fc48dd5333d51a15728999009c83]
F   P           [Chi-Squared and McNemar Tests] [Chi-Squared Tests...] [2010-11-15 14:12:15] [6ca0fc48dd5333d51a15728999009c83]
-   P         [Chi-Squared and McNemar Tests] [Chi-Squared Tests...] [2010-11-15 10:31:19] [6ca0fc48dd5333d51a15728999009c83]
-   P       [Chi-Squared and McNemar Tests] [Q1 Connected vs. ...] [2010-11-14 21:46:51] [2843717cd92615903379c14ebee3c5df]
-   P       [Chi-Squared and McNemar Tests] [Q1 Connected vs. ...] [2010-11-14 21:56:49] [2843717cd92615903379c14ebee3c5df]
-   P       [Chi-Squared and McNemar Tests] [Q1 Connected vs. ...] [2010-11-14 22:02:52] [2843717cd92615903379c14ebee3c5df]
-   P       [Chi-Squared and McNemar Tests] [Q1 Separate vs. h...] [2010-11-14 22:04:52] [2843717cd92615903379c14ebee3c5df]
-   P       [Chi-Squared and McNemar Tests] [Q1 Connected vs. ...] [2010-11-14 22:06:45] [2843717cd92615903379c14ebee3c5df]
F   P       [Chi-Squared and McNemar Tests] [Q1 Separate vs. D...] [2010-11-14 22:13:51] [2843717cd92615903379c14ebee3c5df]
- R         [Chi-Squared and McNemar Tests] [WS6 Chi 3 - 4] [2010-11-15 09:39:34] [c289bfbb56808c5d93a0f55b5d39f5bd]
F           [Chi-Squared and McNemar Tests] [] [2010-11-16 15:56:10] [de55ccbf69577500a5f46ed42a101114]
Feedback Forum
2010-11-23 18:30:48 [411b43619fc9db329bbcdbf7261c55fb] [reply] 
Hier zien we dat de cell count te laag is (sommige waarden lager dan 5), daarom gebruiken we de “Exact Pearson Chi-squared by simulation” (de student gebruikt deze niet). Bekijk http://www.freestatistics.org/blog/index.php?v=date/2010/Nov/18/t1290071393u28bt7noqrracmf.htm/ voor A/B/C/D. Opvallend is ook, ook al gebruikt hij niet de gesimuleerde test, hij komt toch dezelfde p-waarde uit.
Aangezien de cell count (zoals eerder aangehaald) niet OK is, gaan we ook nog even de vergelijking maken op basis van de groffe indeling HI/LO. (bekijk http://www.freestatistics.org/blog/index.php?v=date/2010/Nov/13/t12896352158vummlkegmvn5eq.htm/ berekening met “Pearson Chi-squared test”) We merken op dat er een verband bestaat tussen depression en connected. Dit is logisch aangezien de p-waarde hier 4 % bedraagt (deze is lager dan de type 1 fout (5%) die ik verkies). In de grafiek zien we duidelijk dat er geen significant verschil is (de balkjes zijn allemaal grijs gekleurd). Hierdoor kunnen we ook concluderen dat het toeval is dat frequentie van HI HI lager is dan verwacht. Idem voor HI LO waar het ook toeval is dat deze frequente hoger ligt dan verwacht. . Verder zien we deze blokjes op de hoofddiagonaal (van linksboven naar rechtsonder) onder de stippellijn (de reële frequentie ligt lager dan de verwachte frequentie) liggen. En op de andere diagonaal (van linksonder naar rechtsboven) boven de stippellijn liggen. Dit wijst bijgevolg op een negatief verband.

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Dataset

Dataseries X:
Download CSV
Histogram
Boxplots 
'A'	'A'	'B'	'B'
'A'	'C'	'A'	'C'
'D'	'B'	'D'	'A'
'D'	'C'	'D'	'B'
'B'	'A'	'A'	'A'
'B'	'D'	'A'	'B'
'A'	'D'	'B'	'A'
'B'	'B'	'B'	'C'
'B'	'B'	'B'	'D'
'A'	'A'	'B'	'B'
'A'	'D'	'A'	'D'
'B'	'B'	'A'	'D'
'A'	'B'	'D'	'A'
'A'	'A'	'A'	'A'
'C'	'A'	'A'	'D'
'C'	'C'	'B'	'A'
'B'	'C'	'B'	'A'
'A'	'A'	'A'	'C'
'A'	'A'	'B'	'D'
'C'	'C'	'A'	'B'
'C'	'C'	'A'	'D'
'D'	'D'	'D'	'A'
'A'	'A'	'B'	'B'
'A'	'A'	'D'	'A'
'A'	'C'	'A'	'C'
'A'	'C'	'D'	'D'
'B'	'B'	'A'	'C'
'C'	'A'	'B'	'A'
'C'	'C'	'B'	'A'
'B'	'C'	'D'	'B'
'D'	'D'	'A'	'D'
'D'	'C'	'C'	'A'
'A'	'D'	'A'	'D'
'B'	'A'	'B'	'C'
'B'	'D'	'B'	'B'
'C'	'C'	'A'	'D'
'D'	'D'	'D'	'A'
'B'	'C'	'B'	'B'
'D'	'D'	'A'	'D'
'B'	'C'	'C'	'D'
'A'	'C'	'B'	'D'
'B'	'C'	'A'	'A'
'A'	'C'	'A'	'D'
'B'	'C'	'D'	'A'
'A'	'D'	'D'	'C'
'A'	'B'	'D'	'B'
'A'	'A'	'B'	'D'
'C'	'B'	'B'	'C'
'B'	'A'	'A'	'A'
'A'	'C'	'C'	'C'
'C'	'A'	'A'	'D'
'C'	'D'	'B'	'A'
'C'	'C'	'D'	'A'
'B'	'A'	'D'	'A'
'C'	'C'	'D'	'C'
'A'	'C'	'B'	'B'
'A'	'B'	'A'	'B'
'D'	'B'	'B'	'D'
'A'	'B'	'D'	'D'
'B'	'B'	'D'	'A'
'D'	'D'	'D'	'A'
'A'	'B'	'C'	'B'
'B'	'B'	'D'	'B'
'D'	'B'	'B'	'A'
'B'	'D'	'B'	'B'
'B'	'A'	'D'	'C'
'B'	'B'	'D'	'A'
'D'	'D'	'D'	'B'
'A'	'A'	'B'	'B'
'B'	'A'	'B'	'A'
'A'	'B'	'B'	'B'
'D'	'A'	'A'	'A'
'B'	'A'	'B'	'B'
'A'	'A'	'B'	'D'
'B'	'D'	'C'	'C'
'A'	'D'	'D'	'A'
'A'	'A'	'A'	'B'
'B'	'D'	'C'	'A'
'D'	'D'	'B'	'B'
'A'	'D'	'C'	'D'
'C'	'B'	'B'	'C'
'A'	'A'	'A'	'D'
'B'	'A'	'B'	'D'
'A'	'C'	'A'	'B'
'C'	'B'	'B'	'B'
'C'	'D'	'B'	'B'
'A'	'A'	'B'	'B'
'C'	'B'	'B'	'B'
'D'	'C'	'C'	'A'
'C'	'C'	'D'	'A'
'D'	'B'	'A'	'B'
'B'	'C'	'C'	'A'
'B'	'A'	'B'	'B'
'C'	'D'	'B'	'A'
'D'	'D'	'C'	'D'
'A'	'B'	'A'	'C'
'A'	'B'	'D'	'A'
'B'	'D'	'B'	'C'
'A'	'B'	'A'	'C'
'C'	'B'	'B'	'D'
'A'	'B'	'A'	'D'
'A'	'B'	'D'	'A'
'B'	'A'	'A'	'B'
'C'	'D'	'D'	'C'
'C'	'A'	'B'	'A'
'A'	'C'	'D'	'A'
'A'	'B'	'A'	'C'
'A'	'A'	'B'	'A'
'B'	'B'	'D'	'A'
'A'	'A'	'D'	'A'
'D'	'B'	'B'	'A'
'D'	'C'	'D'	'A'
'C'	'A'	'C'	'C'
'C'	'C'	'B'	'A'
'A'	'B'	'A'	'B'
'A'	'C'	'A'	'D'
'C'	'A'	'B'	'A'
'B'	'A'	'B'	'B'
'C'	'B'	'B'	'D'
'A'	'B'	'B'	'A'
'C'	'A'	'D'	'A'
'D'	'D'	'B'	'A'
'A'	'A'	'B'	'C'
'A'	'A'	'B'	'D'
'C'	'D'	'B'	'C'
'D'	'C'	'C'	'C'
'A'	'C'	'A'	'D'
'A'	'A'	'A'	'D'
'C'	'B'	'A'	'C'
'B'	'C'	'B'	'B'
'C'	'C'	'C'	'C'
'D'	'C'	'D'	'A'
'A'	'A'	'B'	'D'
'D'	'D'	'B'	'A'
'A'	'A'	'B'	'B'
'C'	'D'	'A'	'A'
'D'	'D'	'D'	'A'
'B'	'B'	'B'	'A'
'D'	'B'	'D'	'A'
'B'	'B'	'B'	'C'
'D'	'B'	'C'	'B'
'C'	'B'	'B'	'D'
'D'	'B'	'A'	'A'
'D'	'B'	'B'	'B'
'D'	'D'	'B'	'B'
'A'	'D'	'A'	'C'
'C'	'D'	'A'	'B'
'B'	'B'	'D'	'B'
'C'	'D'	'D'	'C'
'B'	'C'	'D'	'A'
'A'	'A'	'A'	'B'
'A'	'A'	'C'	'A'
'B'	'A'	'A'	'D'
'B'	'A'	'D'	'B'
'B'	'B'	'D'	'A'
'C'	'D'	'C'	'A'
'B'	'C'	'C'	'A'
'C'	'A'	'B'	'A'
'C'	'B'	'A'	'C'
'B'	'C'	'C'	'D'
'C'	'B'	'D'	'A'
'B'	'B'	'C'	'A'

Tables (Output of Computation)





Summary of computational transaction
Raw Inputview raw input (R code)
Raw Outputview raw output of R engine
Computing time2 seconds
R Server'Gwilym Jenkins' @ 72.249.127.135

\begin{tabular}{lllllllll}
\hline
Summary of computational transaction \tabularnewline
Raw Input & view raw input (R code)  \tabularnewline
Raw Output & view raw output of R engine  \tabularnewline
Computing time & 2 seconds \tabularnewline
R Server & 'Gwilym Jenkins' @ 72.249.127.135 \tabularnewline
\hline
\end{tabular}
%Source: https://freestatistics.org/blog/index.php?pk=93203&T=0

[TABLE]
[ROW][C]Summary of computational transaction[/C][/ROW]
[ROW][C]Raw Input[/C][C]view raw input (R code) [/C][/ROW]
[ROW][C]Raw Output[/C][C]view raw output of R engine [/C][/ROW]
[ROW][C]Computing time[/C][C]2 seconds[/C][/ROW]
[ROW][C]R Server[/C][C]'Gwilym Jenkins' @ 72.249.127.135[/C][/ROW]
[/TABLE]
Source: https://freestatistics.org/blog/index.php?pk=93203&T=0

Globally Unique Identifier (entire table): ba.freestatistics.org/blog/index.php?pk=93203&T=0

As an alternative you can also use a QR Code:  
QR Code


The GUIDs for individual cells are displayed in the table below:

Summary of computational transaction
Raw Inputview raw input (R code)
Raw Outputview raw output of R engine
Computing time2 seconds
R Server'Gwilym Jenkins' @ 72.249.127.135






Tabulation of Results
Happiness x Depression
ABCD
A7101016
B1921812
C8254
D26752

\begin{tabular}{lllllllll}
\hline
Tabulation of Results \tabularnewline
Happiness  x  Depression \tabularnewline
  & A & B & C & D \tabularnewline
A & 7 & 10 & 10 & 16 \tabularnewline
B & 19 & 21 & 8 & 12 \tabularnewline
C & 8 & 2 & 5 & 4 \tabularnewline
D & 26 & 7 & 5 & 2 \tabularnewline
\hline
\end{tabular}
%Source: https://freestatistics.org/blog/index.php?pk=93203&T=1

[TABLE]
[ROW][C]Tabulation of Results[/C][/ROW]
[ROW][C]Happiness  x  Depression[/C][/ROW]
[ROW][C] [/C][C]A[/C][C]B[/C][C]C[/C][C]D[/C][/ROW]
[C]A[/C][C]7[/C][C]10[/C][C]10[/C][C]16[/C][/ROW]
[C]B[/C][C]19[/C][C]21[/C][C]8[/C][C]12[/C][/ROW]
[C]C[/C][C]8[/C][C]2[/C][C]5[/C][C]4[/C][/ROW]
[C]D[/C][C]26[/C][C]7[/C][C]5[/C][C]2[/C][/ROW]
[/TABLE]
Source: https://freestatistics.org/blog/index.php?pk=93203&T=1

Globally Unique Identifier (entire table): ba.freestatistics.org/blog/index.php?pk=93203&T=1

As an alternative you can also use a QR Code:  
QR Code


The GUIDs for individual cells are displayed in the table below:

Tabulation of Results
Happiness x Depression
ABCD
A7101016
B1921812
C8254
D26752






Tabulation of Expected Results
Happiness x Depression
ABCD
A15.9310.627.439.02
B22.2214.8110.3712.59
C7.044.693.283.99
D14.819.886.918.4

\begin{tabular}{lllllllll}
\hline
Tabulation of Expected Results \tabularnewline
Happiness  x  Depression \tabularnewline
  & A & B & C & D \tabularnewline
A & 15.93 & 10.62 & 7.43 & 9.02 \tabularnewline
B & 22.22 & 14.81 & 10.37 & 12.59 \tabularnewline
C & 7.04 & 4.69 & 3.28 & 3.99 \tabularnewline
D & 14.81 & 9.88 & 6.91 & 8.4 \tabularnewline
\hline
\end{tabular}
%Source: https://freestatistics.org/blog/index.php?pk=93203&T=2

[TABLE]
[ROW][C]Tabulation of Expected Results[/C][/ROW]
[ROW][C]Happiness  x  Depression[/C][/ROW]
[ROW][C] [/C][C]A[/C][C]B[/C][C]C[/C][C]D[/C][/ROW]
[C]A[/C][C]15.93[/C][C]10.62[/C][C]7.43[/C][C]9.02[/C][/ROW]
[C]B[/C][C]22.22[/C][C]14.81[/C][C]10.37[/C][C]12.59[/C][/ROW]
[C]C[/C][C]7.04[/C][C]4.69[/C][C]3.28[/C][C]3.99[/C][/ROW]
[C]D[/C][C]14.81[/C][C]9.88[/C][C]6.91[/C][C]8.4[/C][/ROW]
[/TABLE]
Source: https://freestatistics.org/blog/index.php?pk=93203&T=2

Globally Unique Identifier (entire table): ba.freestatistics.org/blog/index.php?pk=93203&T=2

As an alternative you can also use a QR Code:  
QR Code


The GUIDs for individual cells are displayed in the table below:

Tabulation of Expected Results
Happiness x Depression
ABCD
A15.9310.627.439.02
B22.2214.8110.3712.59
C7.044.693.283.99
D14.819.886.918.4






Statistical Results
Pearson's Chi-squared test
Chi Square Statistic32.19
Degrees of Freedom9
P value0

\begin{tabular}{lllllllll}
\hline
Statistical Results \tabularnewline
Pearson's Chi-squared test \tabularnewline
Chi Square Statistic & 32.19 \tabularnewline
Degrees of Freedom & 9 \tabularnewline
P value & 0 \tabularnewline
\hline
\end{tabular}
%Source: https://freestatistics.org/blog/index.php?pk=93203&T=3

[TABLE]
[ROW][C]Statistical Results[/C][/ROW]
[ROW][C]Pearson's Chi-squared test[/C][/ROW]
[ROW][C]Chi Square Statistic[/C][C]32.19[/C][/ROW]
[ROW][C]Degrees of Freedom[/C][C]9[/C][/ROW]
[ROW][C]P value[/C][C]0[/C][/ROW]
[/TABLE]
Source: https://freestatistics.org/blog/index.php?pk=93203&T=3

Globally Unique Identifier (entire table): ba.freestatistics.org/blog/index.php?pk=93203&T=3

As an alternative you can also use a QR Code:  
QR Code


The GUIDs for individual cells are displayed in the table below:

Statistical Results
Pearson's Chi-squared test
Chi Square Statistic32.19
Degrees of Freedom9
P value0


Figures (Output of Computation)

Input Parameters & R Code

Parameters (Session):
par1 = 3 ; par2 = 4 ; par3 = Pearson Chi-Squared ;
Parameters (R input):
par1 = 3 ; par2 = 4 ; par3 = Pearson Chi-Squared ;
R code (references can be found in the software module):
library(vcd)
cat1 <- as.numeric(par1) #
cat2<- as.numeric(par2) #
simulate.p.value=FALSE
if (par3 == 'Exact Pearson Chi-Squared by Simulation') simulate.p.value=TRUE
x <- t(x)
(z <- array(unlist(x),dim=c(length(x[,1]),length(x[1,]))))
(table1 <- table(z[,cat1],z[,cat2]))
(V1<-dimnames(y)[[1]][cat1])
(V2<-dimnames(y)[[1]][cat2])
bitmap(file='pic1.png')
assoc(ftable(z[,cat1],z[,cat2],row.vars=1,dnn=c(V1,V2)),shade=T)
dev.off()
load(file='createtable')
a<-table.start()
a<-table.row.start(a)
a<-table.element(a,'Tabulation of Results',ncol(table1)+1,TRUE)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,paste(V1,' x ', V2),ncol(table1)+1,TRUE)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a, ' ', 1,TRUE)
for(nc in 1:ncol(table1)){
a<-table.element(a, colnames(table1)[nc], 1, TRUE)
}
a<-table.row.end(a)
for(nr in 1:nrow(table1) ){
a<-table.element(a, rownames(table1)[nr], 1, TRUE)
for(nc in 1:ncol(table1) ){
a<-table.element(a, table1[nr, nc], 1, FALSE)
}
a<-table.row.end(a)
}
a<-table.end(a)
table.save(a,file='mytable.tab')
(cst<-chisq.test(table1, simulate.p.value=simulate.p.value) )
if (par3 == 'McNemar Chi-Squared') {
(cst <- mcnemar.test(table1))
}
if (par3 != 'McNemar Chi-Squared') {
a<-table.start()
a<-table.row.start(a)
a<-table.element(a,'Tabulation of Expected Results',ncol(table1)+1,TRUE)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,paste(V1,' x ', V2),ncol(table1)+1,TRUE)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a, ' ', 1,TRUE)
for(nc in 1:ncol(table1)){
a<-table.element(a, colnames(table1)[nc], 1, TRUE)
}
a<-table.row.end(a)
for(nr in 1:nrow(table1) ){
a<-table.element(a, rownames(table1)[nr], 1, TRUE)
for(nc in 1:ncol(table1) ){
a<-table.element(a, round(cst$expected[nr, nc], digits=2), 1, FALSE)
}
a<-table.row.end(a)
}
a<-table.end(a)
table.save(a,file='mytable1.tab')
}
a<-table.start()
a<-table.row.start(a)
a<-table.element(a,'Statistical Results',2,TRUE)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a, cst$method, 2,TRUE)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a, 'Chi Square Statistic', 1, TRUE)
a<-table.element(a, round(cst$statistic, digits=2), 1,FALSE)
a<-table.row.end(a)
if(!simulate.p.value){
a<-table.row.start(a)
a<-table.element(a, 'Degrees of Freedom', 1, TRUE)
a<-table.element(a, cst$parameter, 1,FALSE)
a<-table.row.end(a)
}
a<-table.row.start(a)
a<-table.element(a, 'P value', 1, TRUE)
a<-table.element(a, round(cst$p.value, digits=2), 1,FALSE)
a<-table.row.end(a)
a<-table.end(a)
table.save(a,file='mytable2.tab')