ws9

*The author of this computation has been verified*

R Software Module: /rwasp_arimabackwardselection.wasp (opens new window with default values)

Title produced by software: ARIMA Backward Selection

Date of computation: Fri, 04 Dec 2009 06:09:01 -0700

Cite this page as follows:

Statistical Computations at FreeStatistics.org, Office for Research Development and Education, URL http://www.freestatistics.org/blog/date/2009/Dec/04/t12599322130ihrgctkqrxgv32.htm/, Retrieved Fri, 04 Dec 2009 14:10:22 +0100

BibTeX entries for LaTeX users:

@Manual{KEY, author = {{YOUR NAME}}, publisher = {Office for Research Development and Education}, title = {Statistical Computations at FreeStatistics.org, URL http://www.freestatistics.org/blog/date/2009/Dec/04/t12599322130ihrgctkqrxgv32.htm/}, year = {2009}, } @Manual{R, title = {R: A Language and Environment for Statistical Computing}, author = {{R Development Core Team}}, organization = {R Foundation for Statistical Computing}, address = {Vienna, Austria}, year = {2009}, note = {{ISBN} 3-900051-07-0}, url = {http://www.R-project.org}, }

Original text written by user:

IsPrivate?

No (this computation is public)

User-defined keywords:

Dataseries X:

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5594 5585 5710 5511 5403 5826 5884 5965 5960 6064 6046 5954 5952 5960 5983 5996 6021 6094 6202 6276 6306 6342 6345 6328 6191 6261 6253 6198 6247 6293 6381 6448 6470 6516 6532 6526 6533 6498 6507 6464 6453 6468 6497 6808 6793 6907 6792 6757 6734 6654 6589 6469 6521 6448 6410 6528 6445 6458 6215 6167

Output produced by software:

Summary of computational transaction Raw Input view raw input (R code) Raw Output view raw output of R engine Computing time 11 seconds R Server 'Gwilym Jenkins' @ 72.249.127.135 ARIMA Parameter Estimation and Backward Selection Iteration ar1 ar2 ar3 ma1 sar1 sar2 sma1 Estimates ( 1 ) 0.5933 0.0697 0.28 -0.7844 -1.1659 -0.4108 0.9659 (p-val) (0.0015 ) (0.7033 ) (0.0937 ) (0 ) (0.0361 ) (0.0626 ) (0.7285 ) Estimates ( 2 ) 0.5952 0.0743 0.2791 -0.7923 -0.3482 -0.1771 0 (p-val) (0.0014 ) (0.6894 ) (0.1041 ) (0 ) (0.0825 ) (0.4572 ) (NA ) Estimates ( 3 ) 0.6286 0 0.3196 -0.7927 -0.3597 -0.2191 0 (p-val) (2e-04 ) (NA ) (0.0194 ) (0 ) (0.0688 ) (0.2976 ) (NA ) Estimates ( 4 ) 0.6362 0 0.2892 -0.7863 -0.2938 0 0 (p-val) (0.0014 ) (NA ) (0.0388 ) (0 ) (0.0996 ) (NA ) (NA ) Estimates ( 5 ) 0.6378 0 0.2572 -0.7742 0 0 0 (p-val) (0.0066 ) (NA ) (0.0654 ) (2e-04 ) (NA ) (NA ) (NA ) Estimates ( 6 ) -0.1092 0 0 -0.0414 0 0 0 (p-val) (0.8523 ) (NA ) (NA ) (0.943 ) (NA ) (NA ) (NA ) Estimates ( 7 ) -0.1495 0 0 0 0 0 0 (p-val) (0.299 ) (NA ) (NA ) (NA ) (NA ) (NA ) (NA ) Estimates ( 8 ) 0 0 0 0 0 0 0 (p-val) (NA ) (NA ) (NA ) (NA ) (NA ) (NA ) (NA ) Estimates ( 9 ) NA NA NA NA NA NA NA (p-val) (NA ) (NA ) (NA ) (NA ) (NA ) (NA ) (NA ) Estimates ( 10 ) NA NA NA NA NA NA NA (p-val) (NA ) (NA ) (NA ) (NA ) (NA ) (NA ) (NA ) Estimates ( 11 ) NA NA NA NA NA NA NA (p-val) (NA ) (NA ) (NA ) (NA ) (NA ) (NA ) (NA ) Estimates ( 12 ) NA NA NA NA NA NA NA (p-val) (NA ) (NA ) (NA ) (NA ) (NA ) (NA ) (NA ) Estimates ( 13 ) NA NA NA NA NA NA NA (p-val) (NA ) (NA ) (NA ) (NA ) (NA ) (NA ) (NA ) Estimated ARIMA Residuals Value -18.9199982900071 16.7987931300386 -99.4584620893339 196.750772491148 164.694472875306 -330.116203295995 -2.32578072185578 0.475111524462407 33.9534843854976 -62.7674219294779 10.8338483235171 78.1395468421279 -123.787332702873 41.8171988721256 -21.7308617040085 -72.6345691480146 13.8338483204816 -23.4119464660525 -24.0365602256879 -9.99004461162167 -9.04651561407081 8.80398215534933 14.4950223058122 12.9435289975572 145.644524536395 -83.4716787963162 1.30226578897964 14.5415379198785 -58.2059732330272 -39.9701338348677 -63.6345691480156 235.179368395709 -0.521455738202349 62.4684174684999 -120.833848320481 -48.5847922061303 -34.3355646868549 -49.4850669174366 -80.7276003761508 -88.0631650630048 51.4883282452529 -78.5813594733873 -80.1561962911419 -203.016649448937 -96.8539305021577 -111.166151679517 -143.099725288698 -32.1362855143880

Charts produced by software:

http://www.freestatistics.org/blog/date/2009/Dec/04/t12599322130ihrgctkqrxgv32/1xada1259932129.png (open in new window) http://www.freestatistics.org/blog/date/2009/Dec/04/t12599322130ihrgctkqrxgv32/1xada1259932129.ps (open in new window) http://www.freestatistics.org/blog/date/2009/Dec/04/t12599322130ihrgctkqrxgv32/2e2ll1259932129.png (open in new window) http://www.freestatistics.org/blog/date/2009/Dec/04/t12599322130ihrgctkqrxgv32/2e2ll1259932129.ps (open in new window) http://www.freestatistics.org/blog/date/2009/Dec/04/t12599322130ihrgctkqrxgv32/3xb8m1259932129.png (open in new window) http://www.freestatistics.org/blog/date/2009/Dec/04/t12599322130ihrgctkqrxgv32/3xb8m1259932129.ps (open in new window) http://www.freestatistics.org/blog/date/2009/Dec/04/t12599322130ihrgctkqrxgv32/4wt501259932129.png (open in new window) http://www.freestatistics.org/blog/date/2009/Dec/04/t12599322130ihrgctkqrxgv32/4wt501259932129.ps (open in new window) http://www.freestatistics.org/blog/date/2009/Dec/04/t12599322130ihrgctkqrxgv32/5yzl31259932129.png (open in new window) http://www.freestatistics.org/blog/date/2009/Dec/04/t12599322130ihrgctkqrxgv32/5yzl31259932129.ps (open in new window) http://www.freestatistics.org/blog/date/2009/Dec/04/t12599322130ihrgctkqrxgv32/6ills1259932129.png (open in new window) http://www.freestatistics.org/blog/date/2009/Dec/04/t12599322130ihrgctkqrxgv32/6ills1259932129.ps (open in new window) http://www.freestatistics.org/blog/date/2009/Dec/04/t12599322130ihrgctkqrxgv32/7t39d1259932129.png (open in new window) http://www.freestatistics.org/blog/date/2009/Dec/04/t12599322130ihrgctkqrxgv32/7t39d1259932129.ps (open in new window)

Parameters (Session):

par1 = FALSE ; par2 = 1 ; par3 = 1 ; par4 = 1 ; par5 = 12 ; par6 = 3 ; par7 = 1 ; par8 = 2 ; par9 = 1 ;

Parameters (R input):

par1 = FALSE ; par2 = 1 ; par3 = 1 ; par4 = 1 ; par5 = 12 ; par6 = 3 ; par7 = 1 ; par8 = 2 ; par9 = 1 ;

R code (references can be found in the software module):

library(lattice) if (par1 == 'TRUE') par1 <- TRUE if (par1 == 'FALSE') par1 <- FALSE par2 <- as.numeric(par2) #Box-Cox lambda transformation parameter par3 <- as.numeric(par3) #degree of non-seasonal differencing par4 <- as.numeric(par4) #degree of seasonal differencing par5 <- as.numeric(par5) #seasonal period par6 <- as.numeric(par6) #degree (p) of the non-seasonal AR(p) polynomial par7 <- as.numeric(par7) #degree (q) of the non-seasonal MA(q) polynomial par8 <- as.numeric(par8) #degree (P) of the seasonal AR(P) polynomial par9 <- as.numeric(par9) #degree (Q) of the seasonal MA(Q) polynomial armaGR <- function(arima.out, names, n){ try1 <- arima.out$coef try2 <- sqrt(diag(arima.out$var.coef)) try.data.frame <- data.frame(matrix(NA,ncol=4,nrow=length(names))) dimnames(try.data.frame) <- list(names,c('coef','std','tstat','pv')) try.data.frame[,1] <- try1 for(i in 1:length(try2)) try.data.frame[which(rownames(try.data.frame)==names(try2)[i]),2] <- try2[i] try.data.frame[,3] <- try.data.frame[,1] / try.data.frame[,2] try.data.frame[,4] <- round((1-pt(abs(try.data.frame[,3]),df=n-(length(try2)+1)))*2,5) vector <- rep(NA,length(names)) vector[is.na(try.data.frame[,4])] <- 0 maxi <- which.max(try.data.frame[,4]) continue <- max(try.data.frame[,4],na.rm=TRUE) > .05 vector[maxi] <- 0 list(summary=try.data.frame,next.vector=vector,continue=continue) } arimaSelect <- function(series, order=c(13,0,0), seasonal=list(order=c(2,0,0),period=12), include.mean=F){ nrc <- order[1]+order[3]+seasonal$order[1]+seasonal$order[3] coeff <- matrix(NA, nrow=nrc*2, ncol=nrc) pval <- matrix(NA, nrow=nrc*2, ncol=nrc) mylist <- rep(list(NULL), nrc) names <- NULL if(order[1] > 0) names <- paste('ar',1:order[1],sep='') if(order[3] > 0) names <- c( names , paste('ma',1:order[3],sep='') ) if(seasonal$order[1] > 0) names <- c(names, paste('sar',1:seasonal$order[1],sep='')) if(seasonal$order[3] > 0) names <- c(names, paste('sma',1:seasonal$order[3],sep='')) arima.out <- arima(series, order=order, seasonal=seasonal, include.mean=include.mean, method='ML') mylist[[1]] <- arima.out last.arma <- armaGR(arima.out, names, length(series)) mystop <- FALSE i <- 1 coeff[i,] <- last.arma[[1]][,1] pval [i,] <- last.arma[[1]][,4] i <- 2 aic <- arima.out$aic while(!mystop){ mylist[[i]] <- arima.out arima.out <- arima(series, order=order, seasonal=seasonal, include.mean=include.mean, method='ML', fixed=last.arma$next.vector) aic <- c(aic, arima.out$aic) last.arma <- armaGR(arima.out, names, length(series)) mystop <- !last.arma$continue coeff[i,] <- last.arma[[1]][,1] pval [i,] <- last.arma[[1]][,4] i <- i+1 } list(coeff, pval, mylist, aic=aic) } arimaSelectplot <- function(arimaSelect.out,noms,choix){ noms <- names(arimaSelect.out[[3]][[1]]$coef) coeff <- arimaSelect.out[[1]] k <- min(which(is.na(coeff[,1])))-1 coeff <- coeff[1:k,] pval <- arimaSelect.out[[2]][1:k,] aic <- arimaSelect.out$aic[1:k] coeff[coeff==0] <- NA n <- ncol(coeff) if(missing(choix)) choix <- k layout(matrix(c(1,1,1,2, 3,3,3,2, 3,3,3,4, 5,6,7,7),nr=4), widths=c(10,35,45,15), heights=c(30,30,15,15)) couleurs <- rainbow(75)[1:50]#(50) ticks <- pretty(coeff) par(mar=c(1,1,3,1)) plot(aic,k:1-.5,type='o',pch=21,bg='blue',cex=2,axes=F,lty=2,xpd=NA) points(aic[choix],k-choix+.5,pch=21,cex=4,bg=2,xpd=NA) title('aic',line=2) par(mar=c(3,0,0,0)) plot(0,axes=F,xlab='',ylab='',xlim=range(ticks),ylim=c(.1,1)) rect(xleft = min(ticks) + (0:49)/50*(max(ticks)-min(ticks)), xright = min(ticks) + (1:50)/50*(max(ticks)-min(ticks)), ytop = rep(1,50), ybottom= rep(0,50),col=couleurs,border=NA) axis(1,ticks) rect(xleft=min(ticks),xright=max(ticks),ytop=1,ybottom=0) text(mean(coeff,na.rm=T),.5,'coefficients',cex=2,font=2) par(mar=c(1,1,3,1)) image(1:n,1:k,t(coeff[k:1,]),axes=F,col=couleurs,zlim=range(ticks)) for(i in 1:n) for(j in 1:k) if(!is.na(coeff[j,i])) { if(pval[j,i]<.01) symb = 'green' else if( (pval[j,i]<.05) & (pval[j,i]>=.01)) symb = 'orange' else if( (pval[j,i]<.1) & (pval[j,i]>=.05)) symb = 'red' else symb = 'black' polygon(c(i+.5 ,i+.2 ,i+.5 ,i+.5), c(k-j+0.5,k-j+0.5,k-j+0.8,k-j+0.5), col=symb) if(j==choix) { rect(xleft=i-.5, xright=i+.5, ybottom=k-j+1.5, ytop=k-j+.5, lwd=4) text(i, k-j+1, round(coeff[j,i],2), cex=1.2, font=2) } else{ rect(xleft=i-.5,xright=i+.5,ybottom=k-j+1.5,ytop=k-j+.5) text(i,k-j+1,round(coeff[j,i],2),cex=1.2,font=1) } } axis(3,1:n,noms) par(mar=c(0.5,0,0,0.5)) plot(0,axes=F,xlab='',ylab='',type='n',xlim=c(0,8),ylim=c(-.2,.8)) cols <- c('green','orange','red','black') niv <- c('0','0.01','0.05','0.1') for(i in 0:3){ polygon(c(1+2*i ,1+2*i ,1+2*i-.5 ,1+2*i), c(.4 ,.7 , .4 , .4), col=cols[i+1]) text(2*i,0.5,niv[i+1],cex=1.5) } text(8,.5,1,cex=1.5) text(4,0,'p-value',cex=2) box() residus <- arimaSelect.out[[3]][[choix]]$res par(mar=c(1,2,4,1)) acf(residus,main='') title('acf',line=.5) par(mar=c(1,2,4,1)) pacf(residus,main='') title('pacf',line=.5) par(mar=c(2,2,4,1)) qqnorm(residus,main='') title('qq-norm',line=.5) qqline(residus) residus } if (par2 == 0) x <- log(x) if (par2 != 0) x <- x^par2 (selection <- arimaSelect(x, order=c(par6,par3,par7), seasonal=list(order=c(par8,par4,par9), period=par5))) bitmap(file='test1.png') resid <- arimaSelectplot(selection) dev.off() resid bitmap(file='test2.png') acf(resid,length(resid)/2, main='Residual Autocorrelation Function') dev.off() bitmap(file='test3.png') pacf(resid,length(resid)/2, main='Residual Partial Autocorrelation Function') dev.off() bitmap(file='test4.png') cpgram(resid, main='Residual Cumulative Periodogram') dev.off() bitmap(file='test5.png') hist(resid, main='Residual Histogram', xlab='values of Residuals') dev.off() bitmap(file='test6.png') densityplot(~resid,col='black',main='Residual Density Plot', xlab='values of Residuals') dev.off() bitmap(file='test7.png') qqnorm(resid, main='Residual Normal Q-Q Plot') qqline(resid) dev.off() ncols <- length(selection[[1]][1,]) nrows <- length(selection[[2]][,1])-1 load(file='createtable') a<-table.start() a<-table.row.start(a) a<-table.element(a,'ARIMA Parameter Estimation and Backward Selection', ncols+1,TRUE) a<-table.row.end(a) a<-table.row.start(a) a<-table.element(a,'Iteration', header=TRUE) for (i in 1:ncols) { a<-table.element(a,names(selection[[3]][[1]]$coef)[i],header=TRUE) } a<-table.row.end(a) for (j in 1:nrows) { a<-table.row.start(a) mydum <- 'Estimates (' mydum <- paste(mydum,j) mydum <- paste(mydum,')') a<-table.element(a,mydum, header=TRUE) for (i in 1:ncols) { a<-table.element(a,round(selection[[1]][j,i],4)) } a<-table.row.end(a) a<-table.row.start(a) a<-table.element(a,'(p-val)', header=TRUE) for (i in 1:ncols) { mydum <- '(' mydum <- paste(mydum,round(selection[[2]][j,i],4),sep='') mydum <- paste(mydum,')') a<-table.element(a,mydum) } a<-table.row.end(a) } a<-table.end(a) table.save(a,file='mytable.tab') a<-table.start() a<-table.row.start(a) a<-table.element(a,'Estimated ARIMA Residuals', 1,TRUE) a<-table.row.end(a) a<-table.row.start(a) a<-table.element(a,'Value', 1,TRUE) a<-table.row.end(a) for (i in (par4*par5+par3):length(resid)) { a<-table.row.start(a) a<-table.element(a,resid[i]) a<-table.row.end(a) } a<-table.end(a) table.save(a,file='mytable1.tab')

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This work is licensed under a Creative Commons Attribution-Noncommercial-Share Alike 3.0 License.

Software written by Ed van Stee & Patrick Wessa

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