A Set-Based Association Test using GWAS Summary Statistics R package snpsettest version 0.1.2 The goal of 'snpsettest' is to provide simple tools that perform set-based association tests (e.g., gene-based association tests) using GWAS (genome-wide association study) summary statistics. A set-based association test in this package is based on the statistical model described in VEGAS (versatile gene-based association study), which combines the effects of a set of SNPs accounting for linkage disequilibrium between markers. This package uses a different approach from the original VEGAS implementation to compute set-level p values more efficiently, as described in <https://github.com/HimesGroup/snpsettest/wiki/Statistical-test-in-snpsettest>. Software Depends: R (>= 3.1.0) Imports: gaston, data.table, Rcpp LinkingTo: Rcpp, RcppArmadillo Suggests: tidyr, knitr, rmarkdown Jaehyun Joo <jaehyunjoo@outlook.com> Comprehensive R Archive Network (CRAN) Jaehyun Joo [aut, cre], Blanca Himes [aut] GPL (>= 3) 2023-09-09 application/tgz https://CRAN.R-project.org/package=snpsettest doi:10.32614/CRAN.package.snpsettest