<?xml version="1.0" encoding="UTF-8"?>
<oai_dc:dc xmlns:oai_dc="http://www.openarchives.org/OAI/2.0/oai_dc/" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://www.openarchives.org/OAI/2.0/oai_dc/ http://www.openarchives.org/OAI/2.0/oai_dc.xsd">
  <dc:title>Stability-enHanced Approaches using Resampling Procedures</dc:title>
  <dc:title>R package sharp version 1.4.8</dc:title>
  <dc:description>In stability selection (N Meinshausen, P Bühlmann (2010) &lt;doi:10.1111/j.1467-9868.2010.00740.x&gt;) and consensus clustering (S Monti et al (2003) &lt;doi:10.1023/A:1023949509487&gt;), resampling techniques are used to enhance the reliability of the results. In this package (B Bodinier et al (2025) &lt;doi:10.18637/jss.v112.i05&gt;), hyper-parameters are calibrated by maximising model stability, which is measured under the null hypothesis that all selection (or co-membership) probabilities are identical (B Bodinier et al (2023a) &lt;doi:10.1093/jrsssc/qlad058&gt; and B Bodinier et al (2023b) &lt;doi:10.1093/bioinformatics/btad635&gt;). Functions are readily implemented for the use of LASSO regression, sparse PCA, sparse (group) PLS or graphical LASSO in stability selection, and hierarchical clustering, partitioning around medoids, K means or Gaussian mixture models in consensus clustering. </dc:description>
  <dc:type>Software</dc:type>
  <dc:relation>Depends: fake (&gt;= 1.4.0), R (&gt;= 3.5)</dc:relation>
  <dc:relation>Imports: abind, beepr, future, future.apply, glassoFast (&gt;= 1.0.0),
glmnet, grDevices, igraph, mclust, nloptr, plotrix, Rdpack,
withr (&gt;= 2.4.0)</dc:relation>
  <dc:relation>Suggests: cluster, corpcor, dbscan, elasticnet, gglasso, mixOmics,
nnet, OpenMx, RCy3, randomcoloR, rCOSA, rmarkdown, rpart,
sgPLS, sparcl, survival (&gt;= 3.2.13), testthat (&gt;= 3.0.0),
visNetwork</dc:relation>
  <dc:creator>Barbara Bodinier &lt;barbara.bodinier@gmail.com&gt;</dc:creator>
  <dc:publisher>Comprehensive R Archive Network (CRAN)</dc:publisher>
  <dc:contributor>Barbara Bodinier [aut, cre]</dc:contributor>
  <dc:rights>GPL (&gt;= 3)</dc:rights>
  <dc:date>2025-07-23</dc:date>
  <dc:format>application/tgz</dc:format>
  <dc:identifier>https://CRAN.R-project.org/package=sharp</dc:identifier>
  <dc:identifier>doi:10.32614/CRAN.package.sharp</dc:identifier>
  <dc:language>en-GB</dc:language>
</oai_dc:dc>
