Custom Visualizations & Functions for Streamlined Analyses of Single Cell Sequencing R package scCustomize version 3.3.0 Collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using 'R'. 'scCustomize' aims to provide 1) Customized visualizations for aid in ease of use and to create more aesthetic and functional visuals. 2) Improve speed/reproducibility of common tasks/pieces of code in scRNA-seq analysis with a single or group of functions. For citation please use: Marsh SE (2021) "Custom Visualizations & Functions for Streamlined Analyses of Single Cell Sequencing" <doi:10.5281/zenodo.5706430> RRID:SCR_024675. Software Depends: R (>= 4.0.0), Seurat (>= 4.3.0.1) Imports: circlize, cli (>= 3.2.0), cowplot, data.table, dplyr, forcats, ggbeeswarm, ggplot2, ggprism, ggrastr, ggrepel, glue, grDevices, grid, janitor, lifecycle, magrittr, Matrix (>= 1.5.0), mcprogress, methods, paletteer, patchwork, pbapply, purrr, rlang (>= 1.1.3), scales, scattermore (>= 1.2), SeuratObject (>= 5.0.0), stats, stringi, stringr, tibble, tidyr Suggests: BiocFileCache, ComplexHeatmap, dittoSeq, DropletUtils, ggpubr, hdf5r, knitr, Nebulosa, remotes, reticulate, rliger, rmarkdown, scuttle, tidyselect, qs2, viridis Samuel Marsh <sccustomize@gmail.com> Comprehensive R Archive Network (CRAN) Samuel Marsh [aut, cre] (ORCID: <https://orcid.org/0000-0002-3012-6945>), Ming Tang [ctb], Velina Kozareva [ctb], Lucas Graybuck [ctb], Zoe Clarke [ctb] (ORCID: <https://orcid.org/0000-0003-0336-8049>) GPL (>= 3) 2026-05-08 application/tgz https://CRAN.R-project.org/package=scCustomize doi:10.32614/CRAN.package.scCustomize