Genetic Analysis of Populations with Mixed Reproduction R package poppr version 2.9.8 CRAN Task View: Agriculture (https://CRAN.R-project.org/view=Agriculture) Population genetic analyses for hierarchical analysis of partially clonal populations built upon the architecture of the 'adegenet' package. Originally described in Kamvar, Tabima, and Grünwald (2014) <doi:10.7717/peerj.281> with version 2.0 described in Kamvar, Brooks, and Grünwald (2015) <doi:10.3389/fgene.2015.00208>. Software Depends: R (>= 2.15.1), adegenet (>= 2.0.0) Imports: stats, graphics, grDevices, utils, vegan, ggplot2, ape (>= 3.1-1), igraph (>= 1.0.0), methods, ade4, pegas, polysat, dplyr (>= 0.4), rlang, boot, shiny, magrittr, progressr Suggests: testthat, knitr, rmarkdown, poweRlaw, cowplot Zhian N. Kamvar <zkamvar@gmail.com> Comprehensive R Archive Network (CRAN) Zhian N. Kamvar [cre, aut] (ORCID: <https://orcid.org/0000-0003-1458-7108>), Javier F. Tabima [aut] (ORCID: <https://orcid.org/0000-0002-3603-2691>), Sydney E. Everhart [ctb, dtc] (ORCID: <https://orcid.org/0000-0002-5773-1280>), Jonah C. Brooks [aut], Stacy A. Krueger-Hadfield [ctb] (ORCID: <https://orcid.org/0000-0002-7324-7448>), Erik Sotka [ctb], Brian J. Knaus [ctb] (ORCID: <https://orcid.org/0000-0003-1665-4343>), Patrick G. Meirmans [ctb] (ORCID: <https://orcid.org/0000-0002-6395-8107>), Frédéric D. Chevalier [ctb] (ORCID: <https://orcid.org/0000-0003-2611-8106>), David Folarin [aut], Niklaus J. Grünwald [ths] (ORCID: <https://orcid.org/0000-0003-1656-7602>) GPL-2 GPL-3 2025-08-24 application/tgz https://CRAN.R-project.org/package=poppr doi:10.32614/CRAN.package.poppr