<?xml version="1.0" encoding="UTF-8"?>
<oai_dc:dc xmlns:oai_dc="http://www.openarchives.org/OAI/2.0/oai_dc/" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://www.openarchives.org/OAI/2.0/oai_dc/ http://www.openarchives.org/OAI/2.0/oai_dc.xsd">
  <dc:title>Simulation of Parameterized Stochastic Boolean Networks</dc:title>
  <dc:title>R package pastboon version 0.1.4</dc:title>
  <dc:description>A Boolean network is a particular kind of discrete dynamical system where the variables are simple binary switches. Despite its simplicity, Boolean network modeling has been a successful method to describe the behavioral pattern of various phenomena. Applying stochastic noise to Boolean networks is a useful approach for representing the effects of various perturbing stimuli on complex systems. A number of methods have been developed to control noise effects on Boolean networks using parameters integrated into the update rules. This package provides functions to examine three such methods: Boolean network with perturbations (BNp), described by Trairatphisan et al. (2013) &lt;doi:10.1186/1478-811X-11-46&gt;, stochastic discrete dynamical systems (SDDS), proposed by Murrugarra et al. (2012) &lt;doi:10.1186/1687-4153-2012-5&gt;, and Boolean network with probabilistic edge weights (PEW), presented by Deritei et al. (2022) &lt;doi:10.1371/journal.pcbi.1010536&gt;. This package includes source code derived from the 'BoolNet' package, which is licensed under the Artistic License 2.0.</dc:description>
  <dc:type>Software</dc:type>
  <dc:relation>Depends: R (&gt;= 3.5.0)</dc:relation>
  <dc:relation>Suggests: BoolNet</dc:relation>
  <dc:creator>Mohammad Taheri-Ledari &lt;mo.taheri@ut.ac.ir&gt;</dc:creator>
  <dc:publisher>Comprehensive R Archive Network (CRAN)</dc:publisher>
  <dc:contributor>Mohammad Taheri-Ledari [aut, cre, cph] (ORCID:
    &lt;https://orcid.org/0009-0007-9132-077X&gt;),
  Kaveh Kavousi [ctb] (ORCID: &lt;https://orcid.org/0000-0002-1906-3912&gt;),
  Sayed-Amir Marashi [ctb] (ORCID:
    &lt;https://orcid.org/0000-0001-9801-7449&gt;),
  Authors of BoolNet [ctb] (Original authors of the BoolNet package),
  Troy D. Hanson [ctb] (Contributed uthash macros)</dc:contributor>
  <dc:rights>Artistic-2.0</dc:rights>
  <dc:date>2025-01-24</dc:date>
  <dc:format>application/tgz</dc:format>
  <dc:identifier>https://CRAN.R-project.org/package=pastboon</dc:identifier>
  <dc:identifier>doi:10.32614/CRAN.package.pastboon</dc:identifier>
</oai_dc:dc>
