<?xml version="1.0" encoding="UTF-8"?>
<oai_dc:dc xmlns:oai_dc="http://www.openarchives.org/OAI/2.0/oai_dc/" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://www.openarchives.org/OAI/2.0/oai_dc/ http://www.openarchives.org/OAI/2.0/oai_dc.xsd">
  <dc:title>Correction of Preprocessed MS Data</dc:title>
  <dc:title>R package mpactr version 0.3.3</dc:title>
  <dc:description>An 'R' implementation of the 'python' program Metabolomics Peak Analysis Computational Tool ('MPACT') (Robert M. Samples, Sara P. Puckett, and Marcy J. Balunas (2023) &lt;doi:10.1021/acs.analchem.2c04632&gt;). Filters in the package serve to address common errors in tandem mass spectrometry preprocessing, including: (1) isotopic patterns that are incorrectly split during preprocessing, (2) features present in solvent blanks due to carryover between samples, (3) features whose abundance is greater than user-defined abundance threshold in a specific group of samples, for example media blanks, (4) ions that are inconsistent between technical replicates, and (5) in-source fragment ions created during ionization before fragmentation in the tandem mass spectrometry workflow.</dc:description>
  <dc:type>Software</dc:type>
  <dc:relation>Depends: R (&gt;= 3.5.0)</dc:relation>
  <dc:relation>Imports: cli, data.table, ggplot2, R6, Rcpp, stats, treemapify, viridis</dc:relation>
  <dc:relation>LinkingTo: Rcpp</dc:relation>
  <dc:relation>Suggests: knitr, rmarkdown, testthat (&gt;= 3.0.0), tidyverse, plotly,
Hmisc, corrplot, ggdendro, ggtext</dc:relation>
  <dc:creator>Patrick Schloss &lt;pschloss@umich.edu&gt;</dc:creator>
  <dc:publisher>Comprehensive R Archive Network (CRAN)</dc:publisher>
  <dc:contributor>Allison Mason [aut] (ORCID: &lt;https://orcid.org/0000-0003-1339-1592&gt;),
  Gregory Johnson [aut] (ORCID: &lt;https://orcid.org/0009-0008-3890-0297&gt;),
  Patrick Schloss [aut, cre, cph] (ORCID:
    &lt;https://orcid.org/0000-0002-6935-4275&gt;)</dc:contributor>
  <dc:rights>GPL (&gt;= 3)</dc:rights>
  <dc:date>2026-05-21</dc:date>
  <dc:format>application/tgz</dc:format>
  <dc:identifier>https://CRAN.R-project.org/package=mpactr</dc:identifier>
  <dc:identifier>doi:10.32614/CRAN.package.mpactr</dc:identifier>
</oai_dc:dc>
