<?xml version="1.0" encoding="UTF-8"?>
<oai_dc:dc xmlns:oai_dc="http://www.openarchives.org/OAI/2.0/oai_dc/" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://www.openarchives.org/OAI/2.0/oai_dc/ http://www.openarchives.org/OAI/2.0/oai_dc.xsd">
  <dc:title>Gene Locus Plot with Gene Annotations</dc:title>
  <dc:title>R package locuszoomr version 1.1.0</dc:title>
  <dc:description>Publication-ready regional gene locus plots similar to those produced by the web interface 'LocusZoom' &lt;https://my.locuszoom.org&gt;, but running locally in R. Genetic or genomic data with gene annotation tracks are plotted via R base graphics, 'ggplot2' or 'plotly', allowing flexibility and easy customisation including laying out multiple locus plots on the same page. It uses the 'LDlink' API &lt;https://ldlink.nih.gov/?tab=apiaccess&gt; to query linkage disequilibrium data from the 1000 Genomes Project and can overlay this on plots &lt;doi:10.1093/bioadv/vbaf006&gt;.</dc:description>
  <dc:type>Software</dc:type>
  <dc:relation>Depends: R (&gt;= 3.5)</dc:relation>
  <dc:relation>Imports: AnnotationFilter, BiocGenerics, cowplot, dplyr, DT, ensembldb,
GenomeInfoDb, GenomicRanges, gggrid, ggplot2, ggrepel,
graphics, grDevices, grid, gtools, htmltools, IRanges, LDlinkR,
memoise, plotly, Rcpp, rlang, rtracklayer, shiny,
shinycssloaders, shinyFeedback, shinyWidgets, zoo</dc:relation>
  <dc:relation>LinkingTo: Rcpp</dc:relation>
  <dc:relation>Suggests: AnnotationDbi, AnnotationHub, EnsDb.Hsapiens.v75, knitr,
org.Hs.eg.db, rmarkdown</dc:relation>
  <dc:creator>Myles Lewis &lt;myles.lewis@qmul.ac.uk&gt;</dc:creator>
  <dc:publisher>Comprehensive R Archive Network (CRAN)</dc:publisher>
  <dc:contributor>Myles Lewis [aut, cre] (ORCID: &lt;https://orcid.org/0000-0001-9365-5345&gt;),
  Tom Willis [ctb]</dc:contributor>
  <dc:rights>GPL (&gt;= 3)</dc:rights>
  <dc:date>2026-09-17</dc:date>
  <dc:format>application/tgz</dc:format>
  <dc:identifier>https://CRAN.R-project.org/package=locuszoomr</dc:identifier>
  <dc:identifier>doi:10.32614/CRAN.package.locuszoomr</dc:identifier>
  <dc:language>en-gb</dc:language>
</oai_dc:dc>
