Imports: ggraph (>= 2.0.0), graphlayouts (>= 0.5.0), igraph, formatR,
miniUI, rstudioapi, ggplot2, shiny, colourpicker, DT

Suggests: testthat, covr, tibble, purrrlyr, knitr, rmarkdown, magrittr

Imports: torch, ggplot2 (>= 3.3.3), dbscan (>= 1.1-5)

Depends: R (>= 4.1.0)
Imports: graphics, grDevices, methods, stats, utils
Suggests: knitr, rmarkdown, terra, raster, sf, units, sp, testthat (>=
3.0.0)

Depends: R (>= 4.1.0)
Imports: dplyr, jsonlite, readr, testthat, tidyselect, tools, waldo
Suggests: altdoc, bslib, knitr, quarto, rmarkdown, spelling, withr

Depends: R (>= 4.1.0)
Imports: ggplot2, knitr, kableExtra, dplyr, stats
Suggests: rmarkdown, testthat (>= 3.0.0)

Depends: R (>= 3.5.0)
Suggests: testthat (>= 3.0.0), terra, spelling, covr, magick, jpeg,
png, knitr, rmarkdown

Depends: R (>= 4.0.0)
Imports: data.table (>= 1.14.0), cli (>= 3.0.0), utils
Suggests: sf (>= 1.0.0), curl (>= 4.0.0), testthat (>= 3.0.0),
rmarkdown, spelling

Depends: R (>= 4.2)
Imports: shiny, httr, utils, stats, rvest, dplyr, memoise
Suggests: knitr, rmarkdown, covr, testthat, shinydashboard, leaflet,
plotly, DT

Imports: graphics, igraph, parallel, Rcpp, Rdpack, stats

Imports: cli, curl, jsonlite, RcppTOML, rlang, jose, openssl
Suggests: httpuv, keyring, testthat (>= 3.0.0), withr

Imports: yaml, reticulate, RPostgres, RSQLite, DBI, duckdb, dplyr,
dbplyr

Imports: adegenet, doParallel, dplyr, forcats, foreach, ggplot2,
graphics, magrittr, parallel, readr, tidyr, utils, withr, yaml

Depends: R (>= 4.0.0)
Imports: mvtnorm, parallel, survival, tidyr, plyr, ggplot2, poisbinom,
rms, methods
Suggests: testthat, knitr, rmarkdown, biomaRt, VariantAnnotation,
GenomicRanges, IRanges, S4Vectors, org.Hs.eg.db,
TxDb.Hsapiens.UCSC.hg19.knownGene

Imports: vcfR, ggplot2, Rtsne, cluster, adegenet, gridExtra, ggridges,
stats, graphics, utils

Depends: R (>= 4.1.0)
Imports: methods, ggplot2, dplyr, data.table, Rcpp, stringi, anticlust,
grDevices, graphics, stats, utils, MASS, snpStats, magrittr,
reshape2
LinkingTo: Rcpp
Suggests: knitr, rmarkdown, RSpectra, testthat (>= 3.0.0)