A set of functions to generate, access and analyze standard data products from archival tagging data.

An implementation of simulated maximum likelihood method for the estimation of Binary (Probit and Logit), Ordered (Probit and Logit) and Poisson models with random parameters for cross-sectional and longitudinal data as presented in Sarrias (2016) <doi:10.18637/jss.v074.i10>.

Collection of portable choice dialog widgets.

Client for 'ChromaDB', a vector database for storing and querying embeddings. This package provides a convenient interface to interact with the REST API of 'ChromaDB' <https://docs.trychroma.com>.

The concept of reliable and clinically significant change
    (Jacobson & Truax, 1991) helps you answer the following questions for a
    sample with two measurements at different points in time (pre & post):
    Which proportion of my sample has a (considering the reliability of the
    instrument) probably not-just-by-chance difference in pre- vs. post-scores?
    Which proportion of my sample does not only change in a statistically
    significant way (see question one), but also in a clinically significant way
    (e.g. change from a test score regarded "dysfunctional" to a score regarded
    "functional")?
    This package allows you to very easily create a scatterplot of your sample
    in which the x-axis maps to the pre-scores, the y-axis maps to the
    post-scores and several graphical elements (lines, colors) allow you to gain
    a quick overview about reliable changes in these scores.
    An example of this kind of plot is Figure 2 of Jacobson & Truax (1991).
    Referenced article:
    Jacobson, N. S., & Truax, P. (1991) <doi:10.1037/0022-006X.59.1.12>.

A simple and flexible way to generate Circos 2D track plot images for genomic data visualization is implemented in this package. The types of plots include: heatmap, histogram, lines, scatterplot, tiles and plot items for further decorations include connector, link (lines and ribbons), and text (gene) label. All functions require only R graphics package that comes with R base installation.