Depends: R (>= 2.10)
Imports: ape, methods, purrr, SESraster, stats, terra
Suggests: knitr, maps, phylobase, rmarkdown, testthat (>= 2.0.0)

Depends: R (>= 4.1.0)
Imports: ape, phangorn, Matrix, betapart, parallel, methods,
colorspace, igraph, clustMixType, maptpx, terra, vegan,
predicts, smoothr
Suggests: tinytest, knitr, rmarkdown, mapproj, survival, rJava,
phyloseq, V8

Suggests: cowplot, ggplot2, knitr, purrr, RColorBrewer, reshape2,
rmarkdown, testthat (>= 3.0.0)

Imports: sem, ape, phylobase, phylopath, methods
Suggests: semPlot, TreeTools, Rphylopars, phylolm, fishtree, phyr,
knitr, rmarkdown, ggplot2, testthat, phylosignal, adephylo

Imports: ggnetwork (>= 0.5.1), igraph (>= 1.1.2)

Imports: Rcpp (>= 0.11.0), adephylo, igraph, ape, phylobase, boot, DBI,
graphics, grDevices, methods, stats, utils

Depends: R (>= 3.5)
Imports: ape, sf, stats, terra, utils, vegan
Suggests: canaper, furrr, future, testthat (>= 3.0.0), betapart, knitr,
rmarkdown, tmap, magrittr, hillR, picante, phytools, nullcat
(>= 0.2.0), parallelDist

Imports: igraph, methods, NHPoisson, phylobase

Suggests: knitr, rmarkdown, purrr, dplyr, testthat (>= 3.0.0)

Imports: ape, ggplot2, reshape2, Rfast, RSpectra, stats, utils

Depends: R (>= 3.1)
Imports: stats, ape, Rcpp, Matrix, methods, graphics, dplyr, lme4,
nloptr, gridExtra, mvtnorm, latticeExtra, tidyr
LinkingTo: Rcpp, RcppArmadillo
Suggests: testthat, pez, knitr, rmarkdown, covr, picante, rbenchmark,
INLA, MCMCglmm, logistf, phylolm, ggplot2, ggridges, DHARMa,
rr2, future.apply

Depends: R (>= 2.10)
Suggests: RSQLite, DBI, data.table, e1071, keras, randomForest,
reticulate, rms

Depends: R (>= 3.8)
Imports: bestNormalize, dynamicTreeCut, ggplot2, RcppML, stats, tidyr,
progress
Suggests: knitr, rmarkdown, testthat (>= 3.0.0), quarto, here

Imports: ggplot2, ggforce, packcircles, BIOMASS, scales, utils, stats

Depends: R (>= 3.5.0), ape (>= 5.7), maps
Imports: clusterGeneration, coda, combinat, DEoptim, doParallel, expm,
foreach, graphics, grDevices, MASS, methods, mnormt, nlme,
numDeriv, optimParallel, parallel, phangorn (>= 2.3.1),
scatterplot3d, stats, utils
Suggests: animation, geiger, plotrix, RColorBrewer, rgl