Depends: R (>= 3.1.0), methods, stats, graphics, grDevices, utils

Depends: R (>= 3.1.0)
Imports: htmlwidgets, htmltools, magrittr, jsonlite, ggplot2, scales,
shiny, rlang
Suggests: RColorBrewer, testthat, knitr, rmarkdown, covr

Imports: data.table, httr, digest, snakecase, logger, jsonlite

Suggests: knitr, rmarkdown, testthat (>= 2.1.0), vcfppR

Imports: Formula, expm, numDeriv, stats, lmtest, grDevices, graphics

Imports: Rcpp (>= 0.12.0), lhs (>= 0.10), logitnorm (>= 0.8.29), nloptr
(>= 1.0.4), GPfit (>= 1.0-0), stats, graphics, utils, methods

Depends: R (>= 4.0.0)
Imports: Rcpp, compiler, future, doFuture, foreach, doRNG, progressr
LinkingTo: Rcpp
Suggests: stats, GenSA, GA, DEoptim, pso, mlrMBO, mlr, ParamHelpers,
smoof, lhs, DiceKriging, rgenoud, cmaes, nloptr

Imports: graphics, partitions, Rdpack, stats, utils

Depends: R (>= 2.10), wavethresh, adlift (>= 0.9.2), EbayesThresh

Depends: R (>= 3.3)
Imports: rappdirs, yaml, httr, jsonlite, xml2, utils, stats,
assertthat, semver
Suggests: testthat, covr, knitr, rmarkdown

Depends: mvtnorm, corpcor, psych, Matrix

Suggests: lattice, polynom, tcltk, ggplot2

LinkingTo: cpp11
Suggests: testthat (>= 3.0.0), hedgehog (>= 0.1), BBmisc (>= 1.13)

Suggests: covr, penaltyLearning, directlabels, ggplot2, testthat,
knitr, markdown, neuroblastoma, changepoint, quadprog

Depends: methods, graphics, stats, clinfun

Depends: R (>= 3.5.0)
Imports: Rcpp, VGAM, cluster, mvtnorm, spatstat, spatstat.model,
spatstat.geom, spatstat.random, fields, stats
LinkingTo: Rcpp, RcppArmadillo, RcppEigen
Suggests: knitr, rmarkdown, testthat (>= 3.0.0)

Imports: ggplot2, sandwich, quantreg, splines, matrixStats

Imports: stats, rpart
Suggests: discretization, Formula, testthat, BAMMtools, earth

Suggests: testthat, knitr, rmarkdown, pacman (>= 0.5.1), RcppParallel
(>= 5.0.1)

Imports: httr2, jsonlite, digest, data.table, rlang

Depends: R (>= 3.1.0)
Imports: Rcpp, parallel, grid, graphics, grDevices, stats, utils
LinkingTo: Rcpp
Suggests: XML, RCurl, lattice, ncdf4, igraph, bigmemory, knitr,
rmarkdown, testthat (>= 0.9.1), httr, msa, Biostrings