An 'R Commander' plug-in providing an integrated solution to perform
    a series of text mining tasks such as importing and cleaning a corpus, and
    analyses like terms and documents counts, vocabulary tables, terms
    co-occurrences and documents similarity measures, time series analysis,
    correspondence analysis and hierarchical clustering. Corpora can be imported
    from spreadsheet-like files, directories of raw text files,
    as well as from 'Dow Jones Factiva', 'LexisNexis', 'Europresse' and 'Alceste' files.

Some extensions to Rcmdr (R Commander), randomness test, 
 variance test for one normal sample and predictions using active model, 
 made by R-UCA project and used in teaching statistics at University of Cadiz (UCA).

An R Commander plug-in for the 'WorldFlora' package. It was mainly developed to show work flows and scripts for first-time users.

Data sets, and functions for simulating and fitting nonlinear time series with minification and nonparametric models.

Sample size and confidence interval calculations in reversible catalytic models, with applications in malaria research. Further details can be found in the paper by Sepúlveda and Drakeley (2015, <doi:10.1186/s12936-015-0661-z>).

Detects copy number alteration events in targeted exon sequencing 
    data for tumor samples without matched normal controls. The advantage of 
    this method is that it can be applied to smaller sequencing panels including 
    evaluations of exon, transcript, gene, or even user specified genetic
    regions of interest. Functions in the package include steps for GC-content
    correction, calculation of quantile based normal karyotype ranges,
    and calculation of feature score.  Cutoffs for "normal" quantile and score
    are user-adjustable.

Functions in this package will import filtered variant call format (VCF) files of SNPs data and generate data sets to detect copy number variants, visualize them and do downstream analyses with copy number variants(e.g. Environmental association analyses).