Imports: config, dplyr, DT, here, htmlwidgets, httr, jsonlite,
magrittr, pins, R6, shiny, shinyjs, shinyWidgets, tibble,
tidyr, yaml, shinyalert, utils
Suggests: knitr, rmarkdown, testthat (>= 3.0.0)

Depends: R (>= 3.5.0)
Imports: utils, magrittr, dplyr, invgamma, mvtnorm, coda, reshape2,
ggplot2
Suggests: knitr, rmarkdown, devtools, cowplot, gridExtra, testthat (>=
3.0.0)

Depends: R (>= 3.5.0)
Imports: coop, compiler, cluster, FateID, FNN, fpc, ggplot2, grDevices,
harmony, ica, igraph, irlba, leiden, locfit, methods, MASS,
Matrix, matrixStats, parallel, pheatmap, princurve, quadprog,
randomForest, runner, Rcpp, RColorBrewer, Rtsne, umap, vegan
LinkingTo: Rcpp (>= 0.11.0)
Suggests: batchelor, DESeq2, knitr, rmarkdown, SingleCellExperiment,
slingshot, SummarizedExperiment

Depends: R (>= 3.5)
Imports: methods, plotwidgets, terra, sf, Rcpp, comat
LinkingTo: Rcpp, comat (>= 0.9.0), RcppArmadillo
Suggests: dplyr, pbapply, testthat (>= 2.1.0), knitr, rmarkdown, covr,
raster

Depends: R (>= 4.0)
Imports: Rcpp, jsonlite, ks, brotli, shiny, shinyFiles, shinyjs,
htmlwidgets, ggplot2 (>= 3.0.0), htmltools, rmarchingcubes,
shape, MASS, magrittr, igraph, dplyr, vctrs, rlang (>= 1.0.0)
LinkingTo: Rcpp, RcppArmadillo, RcppProgress, RcppEnsmallen, rapidjsonr
Suggests: testthat, r3js, knitr, rmarkdown, rstudioapi, plotly,
geometry, readxl, stringr, tibble, tidyr, base64enc, lifecycle,
MCMCpack, spelling

Imports: rjags, MCMCpack, ggplot2, reshape2, rstan, stats, utils,
ggpubr, patchwork, bayesplot, doSNOW, foreach, snow,
parallelly, dplyr
Suggests: knitr, rmarkdown, testthat (>= 3.0.0), BH, glmnet

Imports: dplyr, httr, pbapply, stringr, tidyr, cli, retry

Imports: sfsmisc, scales, stats, graphics

Depends: MASS, Matrix, methods, magrittr, rlang, R (>= 2.10)
Suggests: testthat (>= 3.0.0), numDeriv, phyloseq,
TreeSummarizedExperiment, SummarizedExperiment,
SingleCellExperiment, knitr, dplyr, ggplot2, stringr, parallel,
rmarkdown

Imports: import, ggplot2, tidyr, dplyr, miniUI, shiny, shinyjs, caret,
rlang, shinyscreenshot
Suggests: knitr, rmarkdown, datasets, clValid