Provides a computational framework for identification of B cell clones from
             Adaptive Immune Receptor Repertoire sequencing (AIRR-Seq) data. Three main
             functions are included (identicalClones, hierarchicalClones, and spectralClones)
             that perform clustering among sequences of BCRs/IGs (B cell receptors/immunoglobulins)
             which share the same V gene, J gene and junction length.
             Nouri N and Kleinstein SH (2018) <doi: 10.1093/bioinformatics/bty235>.
             Nouri N and Kleinstein SH (2019) <doi: 10.1101/788620>.
             Gupta NT, et al. (2017) <doi: 10.4049/jimmunol.1601850>.

Handling of behavioural data from the Ethoscope platform 
    (Geissmann, Garcia Rodriguez, Beckwith, French, Jamasb and Gilestro (2017) <DOI:10.1371/journal.pbio.2003026>).
    Ethoscopes (<https://giorgiogilestro.notion.site/Ethoscope-User-Manual-a9739373ae9f4840aa45b277f2f0e3a7>) are an open source/open hardware framework made of 
    interconnected raspberry pis (<https://www.raspberrypi.org>) designed to quantify the behaviour of multiple 
    small animals in a distributed and real-time fashion. The default tracking algorithm records primary variables
    such as xy coordinates, dimensions and speed.
    This package is part of the rethomics framework <https://rethomics.github.io/>.

Assigns a score projection from 0 to 1 between a given in 'vivo' stage and each single cluster from an in 'vitro' dataset. The score is assigned based on the the fraction of specific markers of the in 'vivo' stage that are conserved in the in 'vitro' clusters <https://github.com/ScialdoneLab>.

A coherent, quota-aware workflow layer over the Elsevier
    'Scopus' Search 'API' <https://dev.elsevier.com/sc_apis.html>. It builds
    reproducible search plans, retrieves records with rate-limit handling,
    retry with back-off and optional resumable caching, normalises results to a
    stable tidy schema, extracts and tracks changes in Digital Object
    Identifiers (DOIs), compares publication trends across topics and exports
    to formats compatible with downstream bibliometric tools. Network and 'API'
    errors are surfaced as typed conditions so that callers can respond to them
    programmatically. 'Scopus' is a trademark of Elsevier. This package is an
    independent client and is not affiliated with or endorsed by Elsevier.