Depends: R (>= 4.4), ggplot2 (>= 3.4.0)
Imports: airr, alakazam (>= 1.1.0), ape (>= 5.6), dplyr (>= 1.0),
ggtree, graphics, gridExtra, markdown, methods, phangorn (>=
2.7.1), phylotate, RColorBrewer, rlang, shazam (>= 1.1.1),
stats, stringr, tidyselect, tidyr, utils, pwalign, treeio
Suggests: knitr, rmarkdown, testthat, BiocManager

Suggests: knitr, rmarkdown, terra, testthat (>= 3.0.0), tidyterra

Suggests: rex, covr, testthat, knitr, devtools

Imports: ggplot2, bayesplot, mcclust, cluster, truncnorm

Imports: cluster, dbscan, e1071, exactci, ggplot2, ggpubr, graphics,
raster, rlist, scales, shiny, shinyjs, stats, stringr, utils

Depends: R (>= 3.0.0), methods
Imports: binom, chipPCR, e1071, evd, dgof, multcomp, qpcR, pracma,
rateratio.test, readxl, signal, shiny, spatstat.explore,
spatstat.geom
Suggests: digest, DT, ggplot2, knitr, markdown, rhandsontable,
rmarkdown, shinythemes, xtable

Depends: R (>= 4.1.0)
Imports: glue, httr2, jsonlite, memoise, rlang, tibble

Depends: R (>= 3.5), ggplot2, RColorBrewer, stats, pracma
Imports: grDevices, ggpubr, Matrix, reshape2, graphics, methods,
mvtnorm

Imports: glue, crayon, cli, ggplot2, cowplot, qgraph, bnlearn, MASS

Imports: VGAM, gsl, moments, utils, fitdistrplus

Depends: R (>= 4.1.0)
Imports: arrow, cli, fs, glue, httr2, rlang, tibble
Suggests: dplyr, digest, geoarrow, gert, gh, sf, testthat (>= 3.0.0),
usethis, withr

Depends: R (>= 3.5.0)
Imports: graphics, grDevices, grid, stats, utils, lattice (>= 0.13-6),
Matrix (>= 1.0-3), digest (>= 0.2.3), matrixStats (>= 0.50.2),
png (>= 0.1-2), R.utils (>= 1.32.1), stringi (>= 0.2-3),
stringr (>= 0.4), XML (>= 2.1-0), signal, boot, lme4, lifecycle
Suggests: Cairo (>= 1.5-0), dichromat (>= 1.2-3), foreach, forecast (>=
3.6), gmp (>= 0.5-5), iterators, knitr, RColorBrewer,
rmarkdown, testthat (>= 0.8), tikzDevice, waveslim

Suggests: broom, covr, DBI, dbplyr (>= 2.2.1), ggplot2, knitr, Lahman,
lobstr, nycflights13, purrr, rmarkdown, RSQLite, stringi (>=
1.7.6), testthat (>= 3.1.5), tidyr (>= 1.3.0), withr

Imports: shiny (>= 0.13), miniUI (>= 0.1.1), rstudioapi (>= 0.5),
shinyWidgets, shinyAce, tidyverse, tidyr, stringr, magrittr,
plyr, DT
Suggests: nycflights13, knitr, rmarkdown