Depends: R (>= 4.1.0)
Imports: checkmate, cli, dplyr, ggplot2, patchwork, rlang, stats,
tibble, tidyr, tidyselect
Suggests: knitr, rmarkdown, testthat (>= 3.0.0)

Depends: ggplot2 (>= 2.0.0)
Imports: plyr, reshape2, useful, stats, dplyr (>= 0.6.0), dygraphs,
tibble, magrittr, purrr, plotly
Suggests: testthat (>= 2.0.0), covr, glmnet, maxLik, xgboost,
workflows, parsnip, knitr, rmarkdown

Depends: R (>= 3.5)
Imports: dplyr, Hmisc, magrittr, readr, rhandsontable, rlang, shiny,
shinydashboard, shinyjs, stringr, tibble, utils
Suggests: rmarkdown, shinytest2, testthat (>= 3.0.0)

Depends: R (>= 4.0.0),
Imports: Rcpp (>= 1.0.10), furrr, purrr, future, ggplot2, irlba, DR.SC,
ProFAST, Matrix, ade4, progress, pbapply, dplyr, Seurat, stats,
utils
LinkingTo: Rcpp, RcppArmadillo
Suggests: knitr, rmarkdown, scater, PRECAST, ggrepel, RANN, grDevices

Imports: data.table, rintcal (>= 1.1.0), rice (>= 0.4.0)

Imports: MASS, psych, copula, matrixcalc, stats

Imports: MASS, abind, mvtnorm, parallel, coda, numDeriv, grDevices,
graphics, stats

Depends: R (>= 2.10)
Imports: igraph, lifecycle, Matrix, Rcpp (>= 1.0.11), rlang, stats,
utils, withr
LinkingTo: Rcpp, RcppEigen
Suggests: knitr, rmarkdown, testthat (>= 3.0.0)

Suggests: imager, png, jpeg, tiff, bmp, testthat (>= 3.0.0)

Imports: grDevices, methods, utils, grid, graph, Rgraphviz, ggplot2,
magrittr, dplyr (>= 0.8.0.1), tidyr
Suggests: testthat, car

Imports: shiny, config, shinyjs, httr, dplyr, base64enc, jsonlite, paws
Suggests: knitr, rmarkdown

Depends: R (>= 4.1.0)
Imports: ggplot2 (>= 3.4.0), grDevices, grid, Matrix, R6, stats, utils
Suggests: backbone, brainGraph, centiserve, colorspace, digest, dplyr,
gifski, gridExtra, grImport2, igraph, influenceR, jsonlite,
knitr, Nestimate, network, qgraph, RColorBrewer, reticulate,
rmarkdown, rsvg, scales, sna, testthat (>= 3.0.0), tidygraph,
tna, tnet, viridisLite

Imports: stats, matrixStats, mvtnorm, mgcv, grf

Depends: R (>= 4.1.0)
Imports: R6, S7 (>= 0.2.0), jsonlite, purrr, tibble, dplyr (>= 1.0.0),
tidyr, glue, ggplot2, rlang (>= 1.0), formatR, collapse
Suggests: queryBuilder, vdiffr, testthat (>= 3.0.0), knitr, rmarkdown,
ellmer (>= 0.3.0), withr