Time-Course Gene Set Analysis R package TcGSA version 0.12.13 CRAN Task View: Omics (https://CRAN.R-project.org/view=Omics) Implementation of Time-course Gene Set Analysis (TcGSA), a method for analyzing longitudinal gene-expression data at the gene set level. Method is detailed in: Hejblum, Skinner & Thiebaut (2015) <doi: 10.1371/journal.pcbi.1004310>. Software Depends: R (>= 3.0.2), ggplot2 (>= 2.0.0) Imports: lme4 (>= 1.0-4), reshape2, GSA, multtest, cluster, cowplot, graphics, grDevices, gtools, stringr, splines, stats, utils Suggests: BiocManager, foreach, parallel, doParallel, dearseq, knitr, GEOquery, rmarkdown Boris P Hejblum <boris.hejblum@u-bordeaux.fr> Comprehensive R Archive Network (CRAN) Boris P Hejblum [aut, cre], Damien Chimits [aut], Anthony Devaux [aut] GPL-2 file LICENSE (https://CRAN.R-project.org/package=TcGSA/LICENSE) 2025-07-22 application/tgz https://CRAN.R-project.org/package=TcGSA doi:10.32614/CRAN.package.TcGSA