Detection of Kataegis R package SeqKat version 0.0.9 Kataegis is a localized hypermutation occurring when a region is enriched in somatic SNVs. Kataegis can result from multiple cytosine deaminations catalyzed by the AID/APOBEC family of proteins. This package contains functions to detect kataegis from SNVs in BED format. This package reports two scores per kataegic event, a hypermutation score and an APOBEC mediated kataegic score. Yousif, F. et al.; The Origins and Consequences of Localized and Global Somatic Hypermutation; Biorxiv 2018 <doi:10.1101/287839>. Software Depends: R (>= 2.15.1), foreach, doParallel Imports: Rcpp (>= 0.11.0) LinkingTo: Rcpp Suggests: testthat, doMC, rmarkdown, knitr Paul C. Boutros <pboutros@sbpdiscovery.org> Comprehensive R Archive Network (CRAN) Fouad Yousif [aut], Xihui Lin [aut], Fan Fan [aut], Christopher Lalansingh [aut], John Macdonald [aut], Paul C. Boutros [cre] GPL (>= 2) 2026-01-24 application/tgz https://CRAN.R-project.org/package=SeqKat doi:10.32614/CRAN.package.SeqKat