Last updated on 2025-08-06 05:52:26 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.66 | 249.40 | 262.06 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.84 | 247.01 | 257.85 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 306.52 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 369.69 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 18.00 | 189.00 | 207.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 13.84 | 266.70 | 280.54 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 13.83 | 260.48 | 274.31 | OK | |
| r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 160.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 20.00 | 191.00 | 211.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 157.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 242.00 | 266.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [78s/110s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.430, system: 0.037, elapsed: 1.646 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.899, system: 0.120, elapsed: 11.097 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.178, system: 0.012, elapsed: 0.227 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.656, system: 0.188, elapsed: 4.797 seconds]
Computing values for grid cells...
... done. [user: 0.171, system: 0.004, elapsed: 0.295 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.849, system: 0.386, elapsed: 18.743 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.527, system: 0.038, elapsed: 2.283 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.871, system: 0.068, elapsed: 13.297 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.013, elapsed: 0.380 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.688, system: 0.157, elapsed: 6.835 seconds]
Computing values for grid cells...
... done. [user: 0.158, system: 0.003, elapsed: 0.222 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.962, system: 0.299, elapsed: 23.937 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.515, system: 0.034, elapsed: 2.452 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.942, system: 0.061, elapsed: 14.725 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.184, system: 0.011, elapsed: 0.336 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.611, system: 0.170, elapsed: 6.158 seconds]
Computing values for grid cells...
... done. [user: 0.164, system: 0.003, elapsed: 0.262 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.153, system: 0.214, elapsed: 1.372 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.192, system: 0.513, elapsed: 26.300 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.481, system: 0.033, elapsed: 1.901 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.950, system: 0.079, elapsed: 12.520 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.188, system: 0.012, elapsed: 0.299 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.685, system: 0.176, elapsed: 5.264 seconds]
Computing values for grid cells...
... done. [user: 0.162, system: 0.003, elapsed: 0.222 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.148, system: 0.458, elapsed: 14.129 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.256, system: 0.791, elapsed: 35.199 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [77s/105s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.522, system: 0.049, elapsed: 1.943 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.879, system: 0.069, elapsed: 10.784 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.184, system: 0.013, elapsed: 0.274 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.433, system: 0.184, elapsed: 5.120 seconds]
Computing values for grid cells...
... done. [user: 0.160, system: 0.003, elapsed: 0.239 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.703, system: 0.336, elapsed: 19.063 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.464, system: 0.027, elapsed: 2.230 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.925, system: 0.063, elapsed: 15.261 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.187, system: 0.011, elapsed: 0.279 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.560, system: 0.168, elapsed: 5.268 seconds]
Computing values for grid cells...
... done. [user: 0.163, system: 0.005, elapsed: 0.235 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.823, system: 0.295, elapsed: 24.056 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.509, system: 0.032, elapsed: 2.481 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.916, system: 0.072, elapsed: 12.706 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.189, system: 0.012, elapsed: 0.231 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.409, system: 0.155, elapsed: 4.403 seconds]
Computing values for grid cells...
... done. [user: 0.159, system: 0.002, elapsed: 0.191 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.049, system: 0.208, elapsed: 0.985 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.846, system: 0.526, elapsed: 21.928 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.488, system: 0.028, elapsed: 2.240 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.900, system: 0.059, elapsed: 11.622 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.184, system: 0.012, elapsed: 0.302 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.512, system: 0.175, elapsed: 5.015 seconds]
Computing values for grid cells...
... done. [user: 0.155, system: 0.003, elapsed: 0.209 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.020, system: 0.556, elapsed: 13.910 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 24.904, system: 0.858, elapsed: 34.244 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64