Last updated on 2026-03-26 05:51:00 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 14.25 | 273.36 | 287.61 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 11.17 | 303.02 | 314.19 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 24.00 | 293.39 | 317.39 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 31.00 | 347.80 | 378.80 | OK | |
| r-devel-macos-arm64 | 1.1.4 | 3.00 | 44.00 | 47.00 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 24.00 | 192.00 | 216.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 12.13 | 329.92 | 342.05 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 13.91 | 345.24 | 359.15 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 11.00 | 492.00 | 503.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 22.00 | 195.00 | 217.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 11.00 | 784.00 | 795.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 282.00 | 306.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [100s/447s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.586, system: 0.045, elapsed: 4.430 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.496, system: 0.072, elapsed: 14.513 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.218, system: 0.019, elapsed: 0.405 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.765, system: 0.733, elapsed: 49.529 seconds]
Computing values for grid cells...
... done. [user: 0.171, system: 0.004, elapsed: 0.175 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.814, system: 0.895, elapsed: 70.189 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.657, system: 0.052, elapsed: 1.534 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.765, system: 0.063, elapsed: 13.085 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.220, system: 0.016, elapsed: 1.140 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.003, system: 0.855, elapsed: 135.556 seconds]
Computing values for grid cells...
... done. [user: 0.178, system: 0.005, elapsed: 0.206 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.628, system: 1.038, elapsed: 152.172 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.525, system: 0.033, elapsed: 2.423 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.675, system: 0.058, elapsed: 14.465 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.213, system: 0.014, elapsed: 0.625 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.896, system: 0.746, elapsed: 77.321 seconds]
Computing values for grid cells...
... done. [user: 0.176, system: 0.004, elapsed: 0.435 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.300, system: 0.246, elapsed: 2.036 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.455, system: 1.139, elapsed: 98.403 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.539, system: 0.038, elapsed: 3.135 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.707, system: 0.075, elapsed: 13.645 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.214, system: 0.015, elapsed: 0.235 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.192, system: 0.770, elapsed: 64.262 seconds]
Computing values for grid cells...
... done. [user: 0.180, system: 0.005, elapsed: 0.195 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.608, system: 0.633, elapsed: 35.826 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 31.113, system: 1.562, elapsed: 118.343 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [2m/12m]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.582, system: 0.041, elapsed: 4.452 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.547, system: 0.073, elapsed: 23.525 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.219, system: 0.021, elapsed: 1.143 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.907, system: 0.949, elapsed: 179.788 seconds]
Computing values for grid cells...
... done. [user: 0.169, system: 0.003, elapsed: 0.473 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.004, system: 1.113, elapsed: 210.789 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.557, system: 0.032, elapsed: 4.626 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.640, system: 0.049, elapsed: 26.775 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.211, system: 0.017, elapsed: 1.256 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.816, system: 0.904, elapsed: 167.891 seconds]
Computing values for grid cells...
... done. [user: 0.170, system: 0.004, elapsed: 0.384 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.971, system: 1.028, elapsed: 202.335 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.563, system: 0.034, elapsed: 3.543 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.549, system: 0.056, elapsed: 17.750 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.217, system: 0.016, elapsed: 1.000 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.802, system: 0.810, elapsed: 98.101 seconds]
Computing values for grid cells...
... done. [user: 0.185, system: 0.007, elapsed: 0.452 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.282, system: 0.294, elapsed: 1.923 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.279, system: 1.248, elapsed: 124.171 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.560, system: 0.036, elapsed: 2.734 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.594, system: 0.080, elapsed: 18.072 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.222, system: 0.018, elapsed: 1.104 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.673, system: 0.805, elapsed: 100.164 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.003, elapsed: 0.212 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.492, system: 0.648, elapsed: 30.654 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 30.408, system: 1.624, elapsed: 154.117 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64