CRAN Package Check Results for Maintainer Ramiro Magno <rmagno at pattern.institute>

CRAN Package Check Results for Maintainer ‘Ramiro Magno <rmagno at pattern.institute>’

Last updated on 2026-04-09 05:52:10 CEST.

Package	ERROR	NOTE	OK
batsch			14
boggy			14
CAOP.RAA.2024		3	11
eunis.habitats			14
grantham			14
guescini			14
gwasrapidd			14
hgnc			14
karlen			14
lievens			14
mgi.report.reader		11	3
ruijter			14
rutledge			14
sdtm.terminology			14
sisti			14
vermeulen	2		12

Package batsch

Current CRAN status: OK: 14

Package boggy

Current CRAN status: OK: 14

Package CAOP.RAA.2024

Current CRAN status: NOTE: 3, OK: 11

Version: 0.0.5
Check: installed package size
Result: NOTE installed size is 7.3Mb sub-directories of 1Mb or more: extdata 5.3Mb help 1.9Mb Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Package eunis.habitats

Current CRAN status: OK: 14

Package grantham

Current CRAN status: OK: 14

Package guescini

Current CRAN status: OK: 14

Package gwasrapidd

Current CRAN status: OK: 14

Package hgnc

Current CRAN status: OK: 14

Package karlen

Current CRAN status: OK: 14

Package lievens

Current CRAN status: OK: 14

Package mgi.report.reader

Current CRAN status: NOTE: 11, OK: 3

Version: 0.1.3
Check: DESCRIPTION meta-information
Result: NOTE Missing dependency on R >= 4.2.0 because package code uses the pipe placeholder syntax added in R 4.2.0. File(s) using such syntax: ‘read_mgi_biotype_conflict_rpt.R’ Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-macos-arm64, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64

Package ruijter

Current CRAN status: OK: 14

Package rutledge

Current CRAN status: OK: 14

Package sdtm.terminology

Current CRAN status: OK: 14

Package sisti

Current CRAN status: OK: 14

Package vermeulen

Current CRAN status: ERROR: 2, OK: 12

Version: 0.1.2
Check: tests
Result: ERROR Running ‘spelling.R’ [0s/0s] Running ‘testthat.R’ [7s/62s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/tests.html > # * https://testthat.r-lib.org/reference/test_package.html#special-files > > library(testthat) > library(vermeulen) > > test_check("vermeulen") Saving _problems/test-get_biomarker_dataset-3.R [ FAIL 1 | WARN 1 | SKIP 0 | PASS 0 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-get_biomarker_dataset.R:3:3'): biomarker data set ────────────── Error in `readLines(gzcon(url(url)))`: cannot read from connection Backtrace: ▆ 1. └─vermeulen::get_biomarker_dataset() at test-get_biomarker_dataset.R:3:3 2. ├─vermeulen:::amplification_curves() 3. │ ├─base::withVisible(eval(mc, parent.frame())) 4. │ └─base::eval(mc, parent.frame()) 5. │ └─base::eval(mc, parent.frame()) 6. └─vermeulen (local) `<fn>`() 7. └─base::readLines(gzcon(url(url))) [ FAIL 1 | WARN 1 | SKIP 0 | PASS 0 ] Error: ! Test failures. Execution halted Flavor: r-devel-linux-x86_64-debian-gcc

Version: 0.1.2
Check: tests
Result: ERROR Running ‘spelling.R’ [0s/0s] Running ‘testthat.R’ [8s/62s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/tests.html > # * https://testthat.r-lib.org/reference/test_package.html#special-files > > library(testthat) > library(vermeulen) > > test_check("vermeulen") Saving _problems/test-get_biomarker_dataset-3.R [ FAIL 1 | WARN 1 | SKIP 0 | PASS 0 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-get_biomarker_dataset.R:3:3'): biomarker data set ────────────── Error in `readLines(gzcon(url(url)))`: cannot read from connection Backtrace: ▆ 1. └─vermeulen::get_biomarker_dataset() at test-get_biomarker_dataset.R:3:3 2. ├─vermeulen:::amplification_curves() 3. │ ├─base::withVisible(eval(mc, parent.frame())) 4. │ └─base::eval(mc, parent.frame()) 5. │ └─base::eval(mc, parent.frame()) 6. └─vermeulen (local) `<fn>`() 7. └─base::readLines(gzcon(url(url))) [ FAIL 1 | WARN 1 | SKIP 0 | PASS 0 ] Error: ! Test failures. Execution halted Flavor: r-patched-linux-x86_64