Last updated on 2026-04-09 05:52:09 CEST.
| Package | ERROR | NOTE | OK |
|---|---|---|---|
| phylin | 1 | 1 | 12 |
Current CRAN status: ERROR: 1, NOTE: 1, OK: 12
Version: 2.0.2
Check: CRAN incoming feasibility
Result: NOTE
Maintainer: ‘Pedro Tarroso <ptarroso@cibio.up.pt>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: c(person(given = "Pedro",
family = "Tarroso",
role = c("aut", "cre"),
email = "ptarroso@cibio.up.pt"),
person(given = "Guillermo",
family = "Velo-Anton",
role = "aut"),
person(given = "Silvia",
family = "Carvalho",
role = "aut"))
as necessary.
Package CITATION file contains call(s) to old-style personList() or
as.personList(). Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry(). Please
use bibentry() instead.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc
Version: 2.0.2
Check: examples
Result: ERROR
Running examples in ‘phylin-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: extract.val
> ### Title: Extact pairwise values from a matrix in a specified order.
> ### Aliases: extract.val
> ### Keywords: variogram kriging
>
> ### ** Examples
>
>
> data(vipers)
> data(d.gen)
>
> # calculate midpoints
> mp <- midpoints(vipers[,1:2])
Error in midpoints(vipers[, 1:2]) :
Package 'geometry' is needed for Delaunay triangulation.
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 2.0.2
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘phylin_tutorial.Snw’ using Sweave
Error: processing vignette 'phylin_tutorial.Snw' failed with diagnostics:
chunk 31 (label = midpoints)
Error in midpoints(vipers[, 1:2]) :
Package 'geometry' is needed for Delaunay triangulation.
--- failed re-building ‘phylin_tutorial.Snw’
--- re-building ‘resistance_tutorial.Snw’ using Sweave
Loading required package: raster
Loading required package: sp
Loading required package: igraph
Attaching package: ‘igraph’
The following object is masked from ‘package:raster’:
union
The following objects are masked from ‘package:stats’:
decompose, spectrum
The following object is masked from ‘package:base’:
union
Loading required package: Matrix
Attaching package: ‘gdistance’
The following object is masked from ‘package:igraph’:
normalize
Warning in gen.variogram(geo.dist, simul.gen.dist, lag = 0.01) :
The variogram contains NAs.Consider adjusting the lag.
Warning in gen.variogram(res.dist, simul.gen.dist, lag = 120) :
The variogram contains NAs.Consider adjusting the lag.
--- finished re-building ‘resistance_tutorial.Snw’
SUMMARY: processing the following file failed:
‘phylin_tutorial.Snw’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc