CRAN Package Check Results for Maintainer ‘Aurélie Siberchicot <aurelie.siberchicot at univ-lyon1.fr>’

Last updated on 2026-07-12 05:51:12 CEST.

Package ERROR NOTE OK
ade4 2 11
ade4TkGUI 13
adegraphics 13
adephylo 13
adespatial 13
aods3 1 12
CINID 13
DRomics 13
fitdistrplus 13
Interatrix 13
LDcorSV 13
LifemapR 13
MareyMap 13
Mondrian 13
nlsMicrobio 13
nlstools 13
OnAge 13
phylter 13
ssd4mosaic 8 5

Package ade4

Current CRAN status: NOTE: 2, OK: 11

Version: 1.7-24
Check: dependencies in R code
Result: NOTE Namespace in Imports field not imported from: ‘sp’ All declared Imports should be used. Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Package ade4TkGUI

Current CRAN status: OK: 13

Package adegraphics

Current CRAN status: OK: 13

Package adephylo

Current CRAN status: OK: 13

Package adespatial

Current CRAN status: OK: 13

Package aods3

Current CRAN status: ERROR: 1, OK: 12

Version: 0.6
Check: examples
Result: ERROR Running examples in 'aods3-Ex.R' failed The error most likely occurred in: > ### Name: iccbin > ### Title: Intra-Cluster Correlation for Clustered Binomial data > ### Aliases: iccbin print.iccbin > ### Keywords: datagen > > ### ** Examples > > data(rats) > z <- rats[rats$group == "TREAT", ] > # A: glmm (model linearization) > iccbin(z$n, z$m, method = "A") Error: Downdated VtV is not positive definite Execution halted Flavor: r-devel-windows-x86_64

Package CINID

Current CRAN status: OK: 13

Package DRomics

Current CRAN status: OK: 13

Package fitdistrplus

Current CRAN status: OK: 13

Package Interatrix

Current CRAN status: OK: 13

Package LDcorSV

Current CRAN status: OK: 13

Package LifemapR

Current CRAN status: OK: 13

Package MareyMap

Current CRAN status: OK: 13

Package Mondrian

Current CRAN status: OK: 13

Package nlsMicrobio

Current CRAN status: OK: 13

Package nlstools

Current CRAN status: OK: 13

Package OnAge

Current CRAN status: OK: 13

Package phylter

Current CRAN status: OK: 13

Package ssd4mosaic

Current CRAN status: ERROR: 8, OK: 5

Version: 1.0.4-2
Check: tests
Result: ERROR Running ‘spelling.R’ [0s/0s] Running ‘testthat.R’ [94s/110s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/tests.html > # * https://testthat.r-lib.org/reference/test_package.html#special-files > > library(testthat) > library(ssd4mosaic) > > test_check("ssd4mosaic") Saving _problems/test-golem-recommended-49.R [ FAIL 1 | WARN 0 | SKIP 1 | PASS 68 ] ══ Skipped tests (1) ═══════════════════════════════════════════════════════════ • On CRAN (1): 'test-golem-recommended.R:72:5' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-golem-recommended.R:43:5'): golem-config works ───────────────── Error in `config::get(value = value, config = config, file = file, use_parent = use_parent)`: Attempt to assign nested list value from expression. Only directly assigned values can be used in expressions. Original Error: * loadNamespace(x): there is no package called 'here' Backtrace: ▆ 1. ├─testthat::expect_false(...) at test-golem-recommended.R:43:5 2. │ └─testthat::quasi_label(enquo(object), label) 3. │ └─rlang::eval_bare(expr, quo_get_env(quo)) 4. └─ssd4mosaic:::get_golem_config("app_prod", config = "dev", file = config_file) 5. └─config::get(value = value, config = config, file = file, use_parent = use_parent) [ FAIL 1 | WARN 0 | SKIP 1 | PASS 68 ] Error: ! Test failures. Execution halted Flavor: r-devel-linux-x86_64-debian-clang

Version: 1.0.4-2
Check: tests
Result: ERROR Running ‘spelling.R’ [0s/0s] Running ‘testthat.R’ [66s/83s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/tests.html > # * https://testthat.r-lib.org/reference/test_package.html#special-files > > library(testthat) > library(ssd4mosaic) > > test_check("ssd4mosaic") Saving _problems/test-golem-recommended-49.R [ FAIL 1 | WARN 0 | SKIP 1 | PASS 68 ] ══ Skipped tests (1) ═══════════════════════════════════════════════════════════ • On CRAN (1): 'test-golem-recommended.R:72:5' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-golem-recommended.R:43:5'): golem-config works ───────────────── Error in `config::get(value = value, config = config, file = file, use_parent = use_parent)`: Attempt to assign nested list value from expression. Only directly assigned values can be used in expressions. Original Error: * loadNamespace(x): there is no package called 'here' Backtrace: ▆ 1. ├─testthat::expect_false(...) at test-golem-recommended.R:43:5 2. │ └─testthat::quasi_label(enquo(object), label) 3. │ └─rlang::eval_bare(expr, quo_get_env(quo)) 4. └─ssd4mosaic:::get_golem_config("app_prod", config = "dev", file = config_file) 5. └─config::get(value = value, config = config, file = file, use_parent = use_parent) [ FAIL 1 | WARN 0 | SKIP 1 | PASS 68 ] Error: ! Test failures. Execution halted Flavor: r-devel-linux-x86_64-debian-gcc

Version: 1.0.4-2
Check: tests
Result: ERROR Running ‘spelling.R’ Running ‘testthat.R’ [4m/12m] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/tests.html > # * https://testthat.r-lib.org/reference/test_package.html#special-files > > library(testthat) > library(ssd4mosaic) > > test_check("ssd4mosaic") Saving _problems/test-golem-recommended-49.R [ FAIL 1 | WARN 0 | SKIP 1 | PASS 68 ] ══ Skipped tests (1) ═══════════════════════════════════════════════════════════ • On CRAN (1): 'test-golem-recommended.R:72:5' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-golem-recommended.R:43:5'): golem-config works ───────────────── Error in `config::get(value = value, config = config, file = file, use_parent = use_parent)`: Attempt to assign nested list value from expression. Only directly assigned values can be used in expressions. Original Error: * loadNamespace(x): there is no package called 'here' Backtrace: ▆ 1. ├─testthat::expect_false(...) at test-golem-recommended.R:43:5 2. │ └─testthat::quasi_label(enquo(object), label) 3. │ └─rlang::eval_bare(expr, quo_get_env(quo)) 4. └─ssd4mosaic:::get_golem_config("app_prod", config = "dev", file = config_file) 5. └─config::get(value = value, config = config, file = file, use_parent = use_parent) [ FAIL 1 | WARN 0 | SKIP 1 | PASS 68 ] Error: ! Test failures. Execution halted Flavor: r-devel-linux-x86_64-fedora-clang

Version: 1.0.4-2
Check: tests
Result: ERROR Running 'spelling.R' [0s] Running 'testthat.R' [124s] Running the tests in 'tests/testthat.R' failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/tests.html > # * https://testthat.r-lib.org/reference/test_package.html#special-files > > library(testthat) > library(ssd4mosaic) > > test_check("ssd4mosaic") Saving _problems/test-golem-recommended-49.R [ FAIL 1 | WARN 0 | SKIP 1 | PASS 68 ] ══ Skipped tests (1) ═══════════════════════════════════════════════════════════ • On CRAN (1): 'test-golem-recommended.R:72:5' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-golem-recommended.R:43:5'): golem-config works ───────────────── Error in `config::get(value = value, config = config, file = file, use_parent = use_parent)`: Attempt to assign nested list value from expression. Only directly assigned values can be used in expressions. Original Error: * loadNamespace(x): there is no package called 'here' Backtrace: ▆ 1. ├─testthat::expect_false(...) at test-golem-recommended.R:43:5 2. │ └─testthat::quasi_label(enquo(object), label) 3. │ └─rlang::eval_bare(expr, quo_get_env(quo)) 4. └─ssd4mosaic:::get_golem_config("app_prod", config = "dev", file = config_file) 5. └─config::get(value = value, config = config, file = file, use_parent = use_parent) [ FAIL 1 | WARN 0 | SKIP 1 | PASS 68 ] Error: ! Test failures. Execution halted Flavor: r-devel-windows-x86_64

Version: 1.0.4-2
Check: tests
Result: ERROR Running ‘spelling.R’ [0s/0s] Running ‘testthat.R’ [86s/105s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/tests.html > # * https://testthat.r-lib.org/reference/test_package.html#special-files > > library(testthat) > library(ssd4mosaic) > > test_check("ssd4mosaic") Saving _problems/test-golem-recommended-49.R [ FAIL 1 | WARN 0 | SKIP 1 | PASS 68 ] ══ Skipped tests (1) ═══════════════════════════════════════════════════════════ • On CRAN (1): 'test-golem-recommended.R:72:5' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-golem-recommended.R:43:5'): golem-config works ───────────────── Error in `config::get(value = value, config = config, file = file, use_parent = use_parent)`: Attempt to assign nested list value from expression. Only directly assigned values can be used in expressions. Original Error: * loadNamespace(x): there is no package called 'here' Backtrace: ▆ 1. ├─testthat::expect_false(...) at test-golem-recommended.R:43:5 2. │ └─testthat::quasi_label(enquo(object), label) 3. │ └─rlang::eval_bare(expr, quo_get_env(quo)) 4. └─ssd4mosaic:::get_golem_config("app_prod", config = "dev", file = config_file) 5. └─config::get(value = value, config = config, file = file, use_parent = use_parent) [ FAIL 1 | WARN 0 | SKIP 1 | PASS 68 ] Error: ! Test failures. Execution halted Flavor: r-patched-linux-x86_64

Version: 1.0.4-2
Check: tests
Result: ERROR Running ‘spelling.R’ [0s/0s] Running ‘testthat.R’ [106s/122s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/tests.html > # * https://testthat.r-lib.org/reference/test_package.html#special-files > > library(testthat) > library(ssd4mosaic) > > test_check("ssd4mosaic") Saving _problems/test-golem-recommended-49.R [ FAIL 1 | WARN 0 | SKIP 1 | PASS 68 ] ══ Skipped tests (1) ═══════════════════════════════════════════════════════════ • On CRAN (1): 'test-golem-recommended.R:72:5' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-golem-recommended.R:43:5'): golem-config works ───────────────── Error in `config::get(value = value, config = config, file = file, use_parent = use_parent)`: Attempt to assign nested list value from expression. Only directly assigned values can be used in expressions. Original Error: * loadNamespace(x): there is no package called 'here' Backtrace: ▆ 1. ├─testthat::expect_false(...) at test-golem-recommended.R:43:5 2. │ └─testthat::quasi_label(enquo(object), label) 3. │ └─rlang::eval_bare(expr, quo_get_env(quo)) 4. └─ssd4mosaic:::get_golem_config("app_prod", config = "dev", file = config_file) 5. └─config::get(value = value, config = config, file = file, use_parent = use_parent) [ FAIL 1 | WARN 0 | SKIP 1 | PASS 68 ] Error: ! Test failures. Execution halted Flavor: r-release-linux-x86_64

Version: 1.0.4-2
Check: tests
Result: ERROR Running 'spelling.R' [0s] Running 'testthat.R' [149s] Running the tests in 'tests/testthat.R' failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/tests.html > # * https://testthat.r-lib.org/reference/test_package.html#special-files > > library(testthat) > library(ssd4mosaic) > > test_check("ssd4mosaic") Saving _problems/test-golem-recommended-49.R [ FAIL 1 | WARN 0 | SKIP 1 | PASS 68 ] ══ Skipped tests (1) ═══════════════════════════════════════════════════════════ • On CRAN (1): 'test-golem-recommended.R:72:5' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-golem-recommended.R:43:5'): golem-config works ───────────────── Error in `config::get(value = value, config = config, file = file, use_parent = use_parent)`: Attempt to assign nested list value from expression. Only directly assigned values can be used in expressions. Original Error: * loadNamespace(x): there is no package called 'here' Backtrace: ▆ 1. ├─testthat::expect_false(...) at test-golem-recommended.R:43:5 2. │ └─testthat::quasi_label(enquo(object), label) 3. │ └─rlang::eval_bare(expr, quo_get_env(quo)) 4. └─ssd4mosaic:::get_golem_config("app_prod", config = "dev", file = config_file) 5. └─config::get(value = value, config = config, file = file, use_parent = use_parent) [ FAIL 1 | WARN 0 | SKIP 1 | PASS 68 ] Error: ! Test failures. Execution halted Flavor: r-release-windows-x86_64

Version: 1.0.4-2
Check: tests
Result: ERROR Running 'spelling.R' [0s] Running 'testthat.R' [211s] Running the tests in 'tests/testthat.R' failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/tests.html > # * https://testthat.r-lib.org/reference/test_package.html#special-files > > library(testthat) > library(ssd4mosaic) > > test_check("ssd4mosaic") Saving _problems/test-golem-recommended-49.R [ FAIL 1 | WARN 0 | SKIP 1 | PASS 68 ] ══ Skipped tests (1) ═══════════════════════════════════════════════════════════ • On CRAN (1): 'test-golem-recommended.R:72:5' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-golem-recommended.R:43:5'): golem-config works ───────────────── Error in `config::get(value = value, config = config, file = file, use_parent = use_parent)`: Attempt to assign nested list value from expression. Only directly assigned values can be used in expressions. Original Error: * loadNamespace(x): there is no package called 'here' Backtrace: ▆ 1. ├─testthat::expect_false(...) at test-golem-recommended.R:43:5 2. │ └─testthat::quasi_label(enquo(object), label) 3. │ └─rlang::eval_bare(expr, quo_get_env(quo)) 4. └─ssd4mosaic:::get_golem_config("app_prod", config = "dev", file = config_file) 5. └─config::get(value = value, config = config, file = file, use_parent = use_parent) [ FAIL 1 | WARN 0 | SKIP 1 | PASS 68 ] Error: ! Test failures. Execution halted Flavor: r-oldrel-windows-x86_64