CRAN Package Check Results for Maintainer ‘Dionne Argyropoulos <argyropoulos.d at wehi.edu.au>’

Last updated on 2026-04-09 05:51:54 CEST.

Package	ERROR	OK
SeroTrackR	2	11

Package SeroTrackR

Current CRAN status: ERROR: 2, OK: 11

Version: 1.0.0
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: ... --- re-building ‘FAQs.Rmd’ using rmarkdown --- finished re-building ‘FAQs.Rmd’ --- re-building ‘Pk_Pv_Pf_Serology_Tutorial.Rmd’ using rmarkdown Quitting from Pk_Pv_Pf_Serology_Tutorial.Rmd:63-72 [unnamed-chunk-3] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error in `readRDS()`: ! cannot read from connection --- Backtrace: ▆ 1. └─SeroTrackR::runPlasmoPipeline(...) 2. └─SeroTrackR::classifyResults(...) 3. └─base::readRDS(antibody_model) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'Pk_Pv_Pf_Serology_Tutorial.Rmd' failed with diagnostics: cannot read from connection --- failed re-building ‘Pk_Pv_Pf_Serology_Tutorial.Rmd’ --- re-building ‘PvLDH_Tutorial.Rmd’ using rmarkdown --- finished re-building ‘PvLDH_Tutorial.Rmd’ --- re-building ‘PvSeroApp_R_Tutorial.Rmd’ using rmarkdown Quitting from PvSeroApp_R_Tutorial.Rmd:75-86 [runPvSeroPipeline with classification] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error in `readRDS()`: ! cannot read from connection --- Backtrace: ▆ 1. └─SeroTrackR::runPvSeroPipeline(...) 2. └─SeroTrackR::classifyResults(...) 3. └─base::readRDS(antibody_model) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'PvSeroApp_R_Tutorial.Rmd' failed with diagnostics: cannot read from connection --- failed re-building ‘PvSeroApp_R_Tutorial.Rmd’ --- re-building ‘setup.Rmd’ using rmarkdown [WARNING] Could not fetch resource ../man/figures/magpix_raw.jpeg [WARNING] Could not fetch resource ../man/figures/bioplex_raw.jpeg [WARNING] Could not fetch resource ../man/figures/plate_layout_1.jpeg --- finished re-building ‘setup.Rmd’ SUMMARY: processing the following files failed: ‘Pk_Pv_Pf_Serology_Tutorial.Rmd’ ‘PvSeroApp_R_Tutorial.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-devel-linux-x86_64-debian-gcc

Version: 1.0.0
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: --- re-building 'FAQs.Rmd' using rmarkdown --- finished re-building 'FAQs.Rmd' --- re-building 'Pk_Pv_Pf_Serology_Tutorial.Rmd' using rmarkdown File ../man/figures/SeroTrackR_Pk_Pf_Pv.jpeg not found in resource path Error: processing vignette 'Pk_Pv_Pf_Serology_Tutorial.Rmd' failed with diagnostics: pandoc document conversion failed with error 99 --- failed re-building 'Pk_Pv_Pf_Serology_Tutorial.Rmd' --- re-building 'PvLDH_Tutorial.Rmd' using rmarkdown --- finished re-building 'PvLDH_Tutorial.Rmd' --- re-building 'PvSeroApp_R_Tutorial.Rmd' using rmarkdown File ../man/figures/SeroTrackR_PvSeroApp.jpeg not found in resource path Error: processing vignette 'PvSeroApp_R_Tutorial.Rmd' failed with diagnostics: pandoc document conversion failed with error 99 --- failed re-building 'PvSeroApp_R_Tutorial.Rmd' --- re-building 'setup.Rmd' using rmarkdown File ../man/figures/magpix_raw.jpeg not found in resource path Error: processing vignette 'setup.Rmd' failed with diagnostics: pandoc document conversion failed with error 99 --- failed re-building 'setup.Rmd' SUMMARY: processing the following files failed: 'Pk_Pv_Pf_Serology_Tutorial.Rmd' 'PvSeroApp_R_Tutorial.Rmd' 'setup.Rmd' Error: Vignette re-building failed. Execution halted Flavor: r-oldrel-windows-x86_64