Last updated on 2026-10-02 05:51:16 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.4.1 | 9.75 | 238.73 | 248.48 | OK | |
| r-devel-linux-x86_64-debian-gcc | 0.4.1 | 6.65 | 163.99 | 170.64 | OK | |
| r-devel-linux-x86_64-fedora-clang | 0.4.1 | 173.46 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 0.4.1 | 178.70 | OK | |||
| r-devel-windows-x86_64 | 0.4.1 | 15.00 | 306.00 | 321.00 | OK | |
| r-patched-linux-x86_64 | 0.4.1 | 10.26 | 230.53 | 240.79 | OK | |
| r-release-linux-x86_64 | 0.4.0 | 9.44 | 358.19 | 367.63 | ERROR | |
| r-release-macos-arm64 | 0.4.1 | 2.00 | 80.00 | 82.00 | OK | |
| r-release-macos-x86_64 | 0.4.1 | 7.00 | 302.00 | 309.00 | OK | |
| r-release-windows-x86_64 | 0.4.1 | 14.00 | 288.00 | 302.00 | OK | |
| r-oldrel-macos-arm64 | 0.4.1 | 3.00 | 102.00 | 105.00 | OK | |
| r-oldrel-macos-x86_64 | 0.4.1 | 7.00 | 298.00 | 305.00 | OK | |
| r-oldrel-windows-x86_64 | 0.4.1 | 18.00 | 352.00 | 370.00 | OK |
Version: 0.4.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [204s/246s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(BayesPostEst)
>
> test_check("BayesPostEst")
Loading required package: rjags
Loading required package: coda
Linked to JAGS 4.3.2
Loaded modules: basemod,bugs
Attaching package: 'R2jags'
The following object is masked from 'package:coda':
traceplot
Loading required package: Rcpp
Loading 'brms' package (version 2.23.0). Useful instructions
can be found by typing help('brms'). A more detailed introduction
to the package is available through vignette('brms_overview').
Attaching package: 'brms'
The following object is masked from 'package:stats':
ar
Compiling Stan program...
Start sampling
SAMPLING FOR MODEL 'anon_model' NOW (CHAIN 1).
Chain 1:
Chain 1: Gradient evaluation took 5.7e-05 seconds
Chain 1: 1000 transitions using 10 leapfrog steps per transition would take 0.57 seconds.
Chain 1: Adjust your expectations accordingly!
Chain 1:
Chain 1:
Chain 1: Iteration: 1 / 2000 [ 0%] (Warmup)
Chain 1: Iteration: 200 / 2000 [ 10%] (Warmup)
Chain 1: Iteration: 400 / 2000 [ 20%] (Warmup)
Chain 1: Iteration: 600 / 2000 [ 30%] (Warmup)
Chain 1: Iteration: 800 / 2000 [ 40%] (Warmup)
Chain 1: Iteration: 1000 / 2000 [ 50%] (Warmup)
Chain 1: Iteration: 1001 / 2000 [ 50%] (Sampling)
Chain 1: Iteration: 1200 / 2000 [ 60%] (Sampling)
Chain 1: Iteration: 1400 / 2000 [ 70%] (Sampling)
Chain 1: Iteration: 1600 / 2000 [ 80%] (Sampling)
Chain 1: Iteration: 1800 / 2000 [ 90%] (Sampling)
Chain 1: Iteration: 2000 / 2000 [100%] (Sampling)
Chain 1:
Chain 1: Elapsed Time: 0.128 seconds (Warm-up)
Chain 1: 0.121 seconds (Sampling)
Chain 1: 0.249 seconds (Total)
Chain 1:
SAMPLING FOR MODEL 'anon_model' NOW (CHAIN 2).
Chain 2:
Chain 2: Gradient evaluation took 3e-05 seconds
Chain 2: 1000 transitions using 10 leapfrog steps per transition would take 0.3 seconds.
Chain 2: Adjust your expectations accordingly!
Chain 2:
Chain 2:
Chain 2: Iteration: 1 / 2000 [ 0%] (Warmup)
Chain 2: Iteration: 200 / 2000 [ 10%] (Warmup)
Chain 2: Iteration: 400 / 2000 [ 20%] (Warmup)
Chain 2: Iteration: 600 / 2000 [ 30%] (Warmup)
Chain 2: Iteration: 800 / 2000 [ 40%] (Warmup)
Chain 2: Iteration: 1000 / 2000 [ 50%] (Warmup)
Chain 2: Iteration: 1001 / 2000 [ 50%] (Sampling)
Chain 2: Iteration: 1200 / 2000 [ 60%] (Sampling)
Chain 2: Iteration: 1400 / 2000 [ 70%] (Sampling)
Chain 2: Iteration: 1600 / 2000 [ 80%] (Sampling)
Chain 2: Iteration: 1800 / 2000 [ 90%] (Sampling)
Chain 2: Iteration: 2000 / 2000 [100%] (Sampling)
Chain 2:
Chain 2: Elapsed Time: 0.139 seconds (Warm-up)
Chain 2: 0.196 seconds (Sampling)
Chain 2: 0.335 seconds (Total)
Chain 2:
module glm loaded
Compiling model graph
Resolving undeclared variables
Allocating nodes
Graph information:
Observed stochastic nodes: 500
Unobserved stochastic nodes: 5
Total graph size: 3509
Initializing model
Compiling model graph
Resolving undeclared variables
Allocating nodes
Graph information:
Observed stochastic nodes: 500
Unobserved stochastic nodes: 5
Total graph size: 3015
Initializing model
Compiling model graph
Resolving undeclared variables
Allocating nodes
Graph information:
Observed stochastic nodes: 500
Unobserved stochastic nodes: 3
Total graph size: 3506
Initializing model
Compiling model graph
Resolving undeclared variables
Allocating nodes
Graph information:
Observed stochastic nodes: 500
Unobserved stochastic nodes: 3
Total graph size: 3506
Initializing model
##
## Markov Chain Monte Carlo Package (MCMCpack)
## Copyright (C) 2003-2026 Andrew D. Martin, Kevin M. Quinn, and Jong Hee Park
##
## Support provided by the U.S. National Science Foundation
## (Grants SES-0350646 and SES-0350613)
##
Attaching package: 'MCMCpack'
The following objects are masked from 'package:brms':
ddirichlet, rdirichlet
Loading required package: StanHeaders
rstan version 2.32.7 (Stan version 2.39.0)
For execution on a local, multicore CPU with excess RAM we recommend calling
options(mc.cores = parallel::detectCores()).
To avoid recompilation of unchanged Stan programs, we recommend calling
rstan_options(auto_write = TRUE)
For within-chain threading using `reduce_sum()` or `map_rect()` Stan functions,
change `threads_per_chain` option:
rstan_options(threads_per_chain = 1)
Attaching package: 'rstan'
The following object is masked from 'package:runjags':
extract
The following object is masked from 'package:R2jags':
traceplot
The following object is masked from 'package:coda':
traceplot
Error in `source_dir()`:
! Failed to evaluate './setup.R'.
Caused by error in `stanc()`:
! 0
Syntax error in 'string', line 4, column 33 to column 34, parsing error:
-------------------------------------------------
2: data {
3: int<lower=0> N;
4: int<lower=0,upper=1> volunteer[N];
^
5: vector[N] female;
6: vector[N] neuroticism;
-------------------------------------------------
Ill-formed declaration. ";" expected after variable declaration.
It looks like you are trying to use the old array syntax.
Please use the new syntax:
array[N] int<lower=0, upper=1> volunteer;
Backtrace:
▆
1. ├─testthat::test_check("BayesPostEst")
2. │ └─testthat::test_dir(...)
3. │ └─testthat:::test_files(...)
4. │ └─testthat:::test_files_serial(...)
5. │ └─testthat:::test_files_setup_state(...)
6. │ └─testthat::source_test_setup(".", env)
7. │ └─testthat::source_dir(path, "^setup.*\\.[rR]$", env = env, wrap = FALSE)
8. │ └─base::lapply(...)
9. │ └─testthat (local) FUN(X[[i]], ...)
10. │ └─testthat::source_file(...)
11. │ ├─base::withCallingHandlers(...)
12. │ └─base::eval(exprs, env)
13. │ └─base::eval(exprs, env)
14. │ └─base::lapply(r_scripts, source) at ./setup.R:24:1
15. │ └─base (local) FUN(X[[i]], ...)
16. │ ├─base::withVisible(eval(ei, envir))
17. │ └─base::eval(ei, envir)
18. │ └─base::eval(ei, envir)
19. ├─rstan::stan(...)
20. │ └─rstan::stan_model(...)
21. │ └─rstan::stanc(...)
22. │ └─base::stop(paste(model_cppcode$errors, collapse = "\n"))
23. └─base::.handleSimpleError(...)
24. └─testthat (local) h(simpleError(msg, call))
25. └─cli::cli_abort(...)
26. └─rlang::abort(...)
Execution halted
Flavor: r-release-linux-x86_64