Cytokine Profiling Analysis Tool

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Documentation for package ‘CytoProfile’ version 0.2.4

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Package NEWS.

Help Pages

adjust_p	Adjust p-values using a specified method
apply_scale	Apply a scale transformation to numeric columns
cyt_anova	ANOVA Analysis on Continuous Variables. *[Deprecated]*
cyt_bp	Boxplots for Continuous Variables with Optional Grouping
cyt_bp2	Boxplot Function Enhanced for Specific Group Comparisons. *[Deprecated]*
cyt_dualflashplot	Dual-flashlight Plot
cyt_errbp	Error-bar Plot
cyt_export	Generic export function for Cytokine plots
cyt_heatmap	Heat Map
cyt_mint_splsda	Analyze data with Multivariate INTegration (MINT) Sparse Partial Least Squares Discriminant Analysis (sPLS-DA).
cyt_pca	Analyze Data with Principal Component Analysis (PCA) for Cytokines.
cyt_rf	Run Random Forest Classification on Cytokine Data,
cyt_skku	Distribution of the Data Set Shown by Skewness and Kurtosis.
cyt_splsda	Analyze data with Sparse Partial Least Squares Discriminant Analysis (sPLS-DA).
cyt_ttest	Two Sample T-test Comparisons. *[Deprecated]*
cyt_univariate	Pairwise Univariate Tests Between Two Groups
cyt_univariate_multi	Univariate Tests for Multi‑Level Categorical Predictors
cyt_violin	Violin Plots for Continuous Variables with Optional Grouping
cyt_volc	Volcano plot
cyt_xgb	Run XGBoost Classification on Cytokine Data.
ExampleData1	Example Cytokine Profiling Data 1.
ExampleData2	Example Cytokine Profiling Data 2.
ExampleData3	Example Cytokine Profiling Data 3.
ExampleData4	Example Cytokine Profiling Data 4.
ExampleData5	Example Cytokine Profiling Data 5.