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| cl.mb | Internal function for MBCluster.Seq package |
| cl.mb.est.MC | Internal function for MBCluster.Seq package |
| cl.mb.est.mc | Internal function for MBCluster.Seq package |
| cl.mb.est.P | Internal function for MBCluster.Seq package |
| cl.nb.est.c | Internal function for MBCluster.Seq package |
| cl.nb.est.m | Internal function for MBCluster.Seq package |
| cl.nb.est.mc | Internal function for MBCluster.Seq package |
| cl.ps.est.mc | Internal function for MBCluster.Seq package |
| Cluster.RNASeq | Do clustering for count data based on poisson or negative-binomial model |
| Count | Sample of Count Data |
| dst.euclidean.pair | Internal function for MBCluster.Seq package |
| dst.KL | Internal function for MBCluster.Seq package |
| dst.maximum.pair | Internal function for MBCluster.Seq package |
| dst.pairs | Internal function for MBCluster.Seq package |
| dst.pearson.pair | Internal function for MBCluster.Seq package |
| dst.Ward | Internal function for MBCluster.Seq package |
| dst2center.pairs | Internal function for MBCluster.Seq package |
| est.nb.mu.mle.one | Internal function for MBCluster.Seq package |
| est.nb.v.QL | Internal function for MBCluster.Seq package |
| est.nb.v.QL.one | Internal function for MBCluster.Seq package |
| Hybrid.Tree | Do hybrid-hierarchical clustering for RNA-seq data |
| Hybrid.Tree.Microarray | Internal function for MBCluster.Seq package |
| in.tree | Internal function for MBCluster.Seq package |
| KmeansPlus.RNASeq | Initialize the cluster centroids by a model-based Kmeans++ algorithm |
| leaf.color | Internal function for MBCluster.Seq package |
| lglk.cluster | Internal function for MBCluster.Seq package |
| lglk.cluster.one | Internal function for MBCluster.Seq package |
| lglk.nb | Internal function for MBCluster.Seq package |
| lglk.nb.1c | Internal function for MBCluster.Seq package |
| lglk.nb.c | Internal function for MBCluster.Seq package |
| lglk.ps | Internal function for MBCluster.Seq package |
| lglk.ps.1c | Internal function for MBCluster.Seq package |
| lglk.ps.c | Internal function for MBCluster.Seq package |
| loc.node | Internal function for MBCluster.Seq package |
| maxRow | Internal function for MBCluster.Seq package |
| MBCluster.Seq.Internal | Internal function for MBCluster.Seq package |
| meanCol | Internal function for MBCluster.Seq package |
| meanRow | Internal function for MBCluster.Seq package |
| MI.1 | Internal function for MBCluster.Seq package |
| MI.2 | Internal function for MBCluster.Seq package |
| MI.Cluster.Annotation | Internal function for MBCluster.Seq package |
| MI.score | Internal function for MBCluster.Seq package |
| MI.score.one | Internal function for MBCluster.Seq package |
| minRow | Internal function for MBCluster.Seq package |
| move.two | Internal function for MBCluster.Seq package |
| NMI.score | Internal function for MBCluster.Seq package |
| plotbr | Internal function for MBCluster.Seq package |
| plotHybrid.Tree | Plot the tree structure of the hybrid-hierarchical clustering results. |
| RNASeq.Data | Standardize RNASeq Data for Clustering |
| sortNode | Internal function for MBCluster.Seq package |
| sumCol | Internal function for MBCluster.Seq package |
| sumRow | Internal function for MBCluster.Seq package |
| tree.K | Internal function for MBCluster.Seq package |