.findTheta              Perform the EM algorithm of the Bayesian GLM
                        fitting
.getSqrtInvCpp          Get the prewhitening matrix for a single data
                        location
.initialKP              Find the initial values of kappa2 and phi
.logDetQt               Find the log of the determinant of Q_tilde
BOLD_Param_BayesGLM     BOLD
BayesGLM                BayesGLM for CIFTI
BayesGLM2               Group-level Bayesian GLM
Bayes_Param             Bayes
BayesfMRI-package       BayesfMRI: Spatial Bayesian Methods for Task
                        Functional MRI Studies
Connectome_Workbench_Description
                        Connectome Workbench
EM_Param                EM
INLA_Description        INLA
INLA_Latent_Fields_Limit_Description
                        INLA Latent Fields
TR_Param_BayesGLM       TR
activations             Identify field activations
aic_Param               aic
ar_order_Param          ar_order
ar_smooth_Param         ar_smooth
brainstructures_Param_BayesGLM
                        brainstructures
buffer_Param            buffer
contrasts_Param         contrasts
design_Param_BayesGLM   design
do_QC                   Mask out invalid data
emTol_Param             emTol
faces_Param             faces
field_names_Param       field_names
fit_bayesglm            fit_bayesglm
hpf_Param_BayesGLM      hpf
make_mesh               Make Mesh
mask_Param_vertices     mask: vertices
max_threads_Param       max_threads
mean_var_Tol_Param      mean and variance tolerance
mesh_Param_either       mesh: either
mesh_Param_inla         mesh: INLA only
n_threads_Param         n_threads
nbhd_order_Param        nbhd_order
nuisance_Param_BayesGLM
                        nuisance
plot.BGLM               S3 method: use 'view_xifti' to plot a '"BGLM"'
                        object
plot.BGLM2              S3 method: use 'view_xifti' to plot a '"BGLM2"'
                        object
plot.act_BGLM           S3 method: use 'view_xifti' to plot a
                        '"act_BGLM"' object
plot.prev_BGLM          S3 method: use 'view_xifti' to plot a
                        '"prev_BGLM"' object
prevalence              Activations prevalence.
resamp_res_Param_BayesGLM
                        resamp_res
return_INLA_Param       return_INLA
scale_BOLD              Scale the BOLD timeseries
scale_BOLD_Param        scale_BOLD
scrub_Param_BayesGLM    scrub
seed_Param              seed
session_names_Param     session_names
summary.BGLM            Summarize a '"BGLM"' object
summary.BGLM2           Summarize a '"BGLM2"' object
summary.act_BGLM        Summarize a '"act_BGLM"' object
summary.act_fit_bglm    Summarize a '"act_fit_bglm"' object
summary.fit_bglm        Summarize a '"fit_bglm"' object
summary.fit_bglm2       Summarize a '"fit_bglm2"' object
summary.prev_BGLM       Summarize a '"prev_BGLM"' object
summary.prev_fit_bglm   Summarize a '"prev_fit_bglm"' object
surfaces_Param_BayesGLM
                        surfaces
trim_INLA_Param         trim_INLA
verbose_Param           verbose
vertex_areas            Surface area of each vertex
vertices_Param          vertices
vol2spde                Construct a triangular mesh from a 3D
                        volumetric mask
