Summarise and Visualise Characteristics of Patients in the OMOP CDM

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Documentation for package ‘CohortCharacteristics’ version 0.2.0

• DESCRIPTION file.
• User guides, package vignettes and other documentation.

Help Pages

mockCohortCharacteristics	It creates a mock database for testing PatientProfiles package
optionsTableCharacteristics	Additional arguments for the function tableCharacteristics.
optionsTableCohortOverlap	Additional arguments for the function tableCohortOverlap.
optionsTableCohortTiming	Additional arguments for the function tableCohortTiming.
plotCharacteristics	Create a ggplot from the output of summariseCharacteristics. 'r lifecycle::badge("experimental")'
plotCohortAttrition	create a ggplot from the output of summariseLargeScaleCharacteristics.
plotCohortOverlap	Plot the result of summariseCohortOverlap.
plotCohortTiming	Plot summariseCohortTiming results.
plotComparedLargeScaleCharacteristics	create a ggplot from the output of summariseLargeScaleCharacteristics.
plotLargeScaleCharacteristics	create a ggplot from the output of summariseLargeScaleCharacteristics.
summariseCharacteristics	Summarise characteristics of cohorts in a cohort table
summariseCohortAttrition	Summarise attrition associated with cohorts in a cohort table
summariseCohortCount	Summarise counts for cohorts in a cohort table
summariseCohortOverlap	Summarise overlap between cohorts in a cohort table
summariseCohortTiming	Summarise timing between entries into cohorts in a cohort table
summariseLargeScaleCharacteristics	This function is used to summarise the large scale characteristics of a cohort table
tableCharacteristics	Format a summarised_characteristics object into a visual table.
tableCohortAttrition	Create a visual table from the output of summariseCohortAttrition. 'r lifecycle::badge("experimental")'
tableCohortCount	Format a summarised_characteristics object into a visual table.
tableCohortOverlap	Format a summariseOverlapCohort result into a visual table.
tableCohortTiming	Format a summariseCohortTiming result into a visual table.
tableLargeScaleCharacteristics	Format a summarised_large_scale_characteristics object into a visual table.