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R Software Module

rwasp_One Factor ANOVA.wasp

Title produced by software

One-Way-Between-Groups ANOVA- Free Statistics Software (Calculator)

Date of computation

Mon, 19 Jan 2015 14:44:59 +0000

Cite this page as follows

Statistical Computations at FreeStatistics.org, Office for Research Development and Education, URL https://freestatistics.org/blog/index.php?v=date/2015/Jan/19/t1421678710qtel2ub66360msr.htm/, Retrieved Wed, 15 May 2024 15:46:03 +0000

Statistical Computations at FreeStatistics.org, Office for Research Development and Education, URL https://freestatistics.org/blog/index.php?pk=274593, Retrieved Wed, 15 May 2024 15:46:03 +0000

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Family? (F = Feedback message, R = changed R code, M = changed R Module, P = changed Parameters, D = changed Data)

-       [One-Way-Between-Groups ANOVA- Free Statistics Software (Calculator)] [] [2015-01-19 14:44:59] [c627838e8e29a957751cabcf62378089] [Current]

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Summary of computational transaction
Raw Input	view raw input (R code)
Raw Output	view raw output of R engine
Computing time	1 seconds
R Server	'George Udny Yule' @ yule.wessa.net

\begin{tabular}{lllllllll}
\hline
Summary of computational transaction \tabularnewline
Raw Input & view raw input (R code)  \tabularnewline
Raw Output & view raw output of R engine  \tabularnewline
Computing time & 1 seconds \tabularnewline
R Server & 'George Udny Yule' @ yule.wessa.net \tabularnewline
\hline
\end{tabular}
%Source: https://freestatistics.org/blog/index.php?pk=274593&T=0

[TABLE]
[ROW][C]Summary of computational transaction[/C][/ROW]
[ROW][C]Raw Input[/C][C]view raw input (R code) [/C][/ROW]
[ROW][C]Raw Output[/C][C]view raw output of R engine [/C][/ROW]
[ROW][C]Computing time[/C][C]1 seconds[/C][/ROW]
[ROW][C]R Server[/C][C]'George Udny Yule' @ yule.wessa.net[/C][/ROW]
[/TABLE]
Source: https://freestatistics.org/blog/index.php?pk=274593&T=0

Globally Unique Identifier (entire table): ba.freestatistics.org/blog/index.php?pk=274593&T=0

As an alternative you can also use a QR Code:

The GUIDs for individual cells are displayed in the table below:

Summary of computational transaction
Raw Input	view raw input (R code)
Raw Output	view raw output of R engine
Computing time	1 seconds
R Server	'George Udny Yule' @ yule.wessa.net

ANOVA Model
NUMERACYTOT ~ group
means	20.221	19.782

\begin{tabular}{lllllllll}
\hline
ANOVA Model \tabularnewline
NUMERACYTOT  ~  group \tabularnewline
means & 20.221 & 19.782 \tabularnewline
\hline
\end{tabular}
%Source: https://freestatistics.org/blog/index.php?pk=274593&T=1

[TABLE]
[ROW][C]ANOVA Model[/C][/ROW]
[ROW][C]NUMERACYTOT  ~  group[/C][/ROW]
[ROW][C]means[/C][C]20.221[/C][C]19.782[/C][/ROW]
[/TABLE]
Source: https://freestatistics.org/blog/index.php?pk=274593&T=1

Globally Unique Identifier (entire table): ba.freestatistics.org/blog/index.php?pk=274593&T=1

As an alternative you can also use a QR Code:

The GUIDs for individual cells are displayed in the table below:

ANOVA Model
NUMERACYTOT ~ group
means	20.221	19.782

ANOVA Statistics
	Df	Sum Sq	Mean Sq	F value	Pr(>F)
group	2	111173.385	55586.693	2117.993	0
Residuals	276	7243.615	26.245

\begin{tabular}{lllllllll}
\hline
ANOVA Statistics \tabularnewline
  & Df & Sum Sq & Mean Sq & F value & Pr(>F) \tabularnewline
group & 2 & 111173.385 & 55586.693 & 2117.993 & 0 \tabularnewline
Residuals & 276 & 7243.615 & 26.245 &   &   \tabularnewline
\hline
\end{tabular}
%Source: https://freestatistics.org/blog/index.php?pk=274593&T=2

[TABLE]
[ROW][C]ANOVA Statistics[/C][/ROW]
[ROW][C] [/C][C]Df[/C][C]Sum Sq[/C][C]Mean Sq[/C][C]F value[/C][C]Pr(>F)[/C][/ROW]
[ROW][C]group[/C][C]2[/C][C]111173.385[/C][C]55586.693[/C][C]2117.993[/C][C]0[/C][/ROW]
[ROW][C]Residuals[/C][C]276[/C][C]7243.615[/C][C]26.245[/C][C] [/C][C] [/C][/ROW]
[/TABLE]
Source: https://freestatistics.org/blog/index.php?pk=274593&T=2

Globally Unique Identifier (entire table): ba.freestatistics.org/blog/index.php?pk=274593&T=2

As an alternative you can also use a QR Code:

The GUIDs for individual cells are displayed in the table below:

ANOVA Statistics
	Df	Sum Sq	Mean Sq	F value	Pr(>F)
group	2	111173.385	55586.693	2117.993	0
Residuals	276	7243.615	26.245

Must Include Intercept to use Tukey Test

\begin{tabular}{lllllllll}
\hline
Must Include Intercept to use Tukey Test  \tabularnewline
\hline
\end{tabular}
%Source: https://freestatistics.org/blog/index.php?pk=274593&T=3

[TABLE]
[ROW][C]Must Include Intercept to use Tukey Test [/C][/ROW]
[/TABLE]
Source: https://freestatistics.org/blog/index.php?pk=274593&T=3

Globally Unique Identifier (entire table): ba.freestatistics.org/blog/index.php?pk=274593&T=3

As an alternative you can also use a QR Code:

The GUIDs for individual cells are displayed in the table below:

Must Include Intercept to use Tukey Test

Levenes Test for Homogeneity of Variance
	Df	F value	Pr(>F)
Group	1	1.33	0.25
	276

\begin{tabular}{lllllllll}
\hline
Levenes Test for Homogeneity of Variance \tabularnewline
  & Df & F value & Pr(>F) \tabularnewline
Group & 1 & 1.33 & 0.25 \tabularnewline
  & 276 &   &   \tabularnewline
\hline
\end{tabular}
%Source: https://freestatistics.org/blog/index.php?pk=274593&T=4

[TABLE]
[ROW][C]Levenes Test for Homogeneity of Variance[/C][/ROW]
[ROW][C] [/C][C]Df[/C][C]F value[/C][C]Pr(>F)[/C][/ROW]
[ROW][C]Group[/C][C]1[/C][C]1.33[/C][C]0.25[/C][/ROW]
[ROW][C] [/C][C]276[/C][C] [/C][C] [/C][/ROW]
[/TABLE]
Source: https://freestatistics.org/blog/index.php?pk=274593&T=4

Globally Unique Identifier (entire table): ba.freestatistics.org/blog/index.php?pk=274593&T=4

As an alternative you can also use a QR Code:

The GUIDs for individual cells are displayed in the table below:

Levenes Test for Homogeneity of Variance
	Df	F value	Pr(>F)
Group	1	1.33	0.25
	276

Figure 1

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Postscript link

PDF link

Figure 2

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Postscript link

PDF link

Parameters (Session):

par1 = 1 ; par2 = 2 ; par3 = 0.95 ; par4 = two.sided ; par5 = unpaired ; par6 = 0.0 ;

Parameters (R input):

par1 = 1 ; par2 = 2 ; par3 = FALSE ;

R code (references can be found in the software module):

cat1 <- as.numeric(par1) #
cat2<- as.numeric(par2) #
intercept<-as.logical(par3)
x <- t(x)
x1<-as.numeric(x[,cat1])
f1<-as.character(x[,cat2])
xdf<-data.frame(x1,f1)
(V1<-dimnames(y)[[1]][cat1])
(V2<-dimnames(y)[[1]][cat2])
names(xdf)<-c('Response', 'Treatment')
if(intercept == FALSE) (lmxdf<-lm(Response ~ Treatment - 1, data = xdf) ) else (lmxdf<-lm(Response ~ Treatment, data = xdf) )
(aov.xdf<-aov(lmxdf) )
(anova.xdf<-anova(lmxdf) )
load(file='createtable')
a<-table.start()
a<-table.row.start(a)
a<-table.element(a,'ANOVA Model', length(lmxdf$coefficients)+1,TRUE)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a, paste(V1, ' ~ ', V2), length(lmxdf$coefficients)+1,TRUE)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a, 'means',,TRUE)
for(i in 1:length(lmxdf$coefficients)){
a<-table.element(a, round(lmxdf$coefficients[i], digits=3),,FALSE)
}
a<-table.row.end(a)
a<-table.end(a)
table.save(a,file='mytable.tab')
a<-table.start()
a<-table.row.start(a)
a<-table.element(a,'ANOVA Statistics', 5+1,TRUE)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a, ' ',,TRUE)
a<-table.element(a, 'Df',,FALSE)
a<-table.element(a, 'Sum Sq',,FALSE)
a<-table.element(a, 'Mean Sq',,FALSE)
a<-table.element(a, 'F value',,FALSE)
a<-table.element(a, 'Pr(>F)',,FALSE)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a, V2,,TRUE)
a<-table.element(a, anova.xdf$Df[1],,FALSE)
a<-table.element(a, round(anova.xdf$'Sum Sq'[1], digits=3),,FALSE)
a<-table.element(a, round(anova.xdf$'Mean Sq'[1], digits=3),,FALSE)
a<-table.element(a, round(anova.xdf$'F value'[1], digits=3),,FALSE)
a<-table.element(a, round(anova.xdf$'Pr(>F)'[1], digits=3),,FALSE)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a, 'Residuals',,TRUE)
a<-table.element(a, anova.xdf$Df[2],,FALSE)
a<-table.element(a, round(anova.xdf$'Sum Sq'[2], digits=3),,FALSE)
a<-table.element(a, round(anova.xdf$'Mean Sq'[2], digits=3),,FALSE)
a<-table.element(a, ' ',,FALSE)
a<-table.element(a, ' ',,FALSE)
a<-table.row.end(a)
a<-table.end(a)
table.save(a,file='mytable1.tab')
bitmap(file='anovaplot.png')
boxplot(Response ~ Treatment, data=xdf, xlab=V2, ylab=V1)
dev.off()
if(intercept==TRUE){
'Tukey Plot'
thsd<-TukeyHSD(aov.xdf)
bitmap(file='TukeyHSDPlot.png')
plot(thsd)
dev.off()
}
if(intercept==TRUE){
a<-table.start()
a<-table.row.start(a)
a<-table.element(a,'Tukey Honest Significant Difference Comparisons', 5,TRUE)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a, ' ', 1, TRUE)
for(i in 1:4){
a<-table.element(a,colnames(thsd[[1]])[i], 1, TRUE)
}
a<-table.row.end(a)
for(i in 1:length(rownames(thsd[[1]]))){
a<-table.row.start(a)
a<-table.element(a,rownames(thsd[[1]])[i], 1, TRUE)
for(j in 1:4){
a<-table.element(a,round(thsd[[1]][i,j], digits=3), 1, FALSE)
}
a<-table.row.end(a)
}
a<-table.end(a)
table.save(a,file='mytable2.tab')
}
if(intercept==FALSE){
a<-table.start()
a<-table.row.start(a)
a<-table.element(a,'TukeyHSD Message', 1,TRUE)
a<-table.row.end(a)
a<-table.start()
a<-table.row.start(a)
a<-table.element(a,'Must Include Intercept to use Tukey Test ', 1, FALSE)
a<-table.row.end(a)
a<-table.end(a)
table.save(a,file='mytable2.tab')
}
library(car)
lt.lmxdf<-leveneTest(lmxdf)
a<-table.start()
a<-table.row.start(a)
a<-table.element(a,'Levenes Test for Homogeneity of Variance', 4,TRUE)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,' ', 1, TRUE)
for (i in 1:3){
a<-table.element(a,names(lt.lmxdf)[i], 1, FALSE)
}
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'Group', 1, TRUE)
for (i in 1:3){
a<-table.element(a,round(lt.lmxdf[[i]][1], digits=3), 1, FALSE)
}
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,' ', 1, TRUE)
a<-table.element(a,lt.lmxdf[[1]][2], 1, FALSE)
a<-table.element(a,' ', 1, FALSE)
a<-table.element(a,' ', 1, FALSE)
a<-table.row.end(a)
a<-table.end(a)
table.save(a,file='mytable3.tab')

Free Statistics

Description of Statistical Computation

Tree of Dependent Computations

Dataset

Tables (Output of Computation)

Figures (Output of Computation)

Input Parameters & R Code