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R Software Module

rwasp_bootstrapplot1.wasp

Title produced by software

Bootstrap Plot - Central Tendency

Date of computation

Wed, 23 Oct 2013 07:46:03 -0400

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Statistical Computations at FreeStatistics.org, Office for Research Development and Education, URL https://freestatistics.org/blog/index.php?v=date/2013/Oct/23/t1382528804f72dtzk556he1d3.htm/, Retrieved Sat, 27 Apr 2024 19:36:04 +0000

Statistical Computations at FreeStatistics.org, Office for Research Development and Education, URL https://freestatistics.org/blog/index.php?pk=218819, Retrieved Sat, 27 Apr 2024 19:36:04 +0000

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-       [Bootstrap Plot - Central Tendency] [] [2013-10-23 11:46:03] [05fc9f73518f9509c56332c989d681e3] [Current]

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Summary of computational transaction
Raw Input	view raw input (R code)
Raw Output	view raw output of R engine
Computing time	7 seconds
R Server	'Sir Maurice George Kendall' @ kendall.wessa.net

\begin{tabular}{lllllllll}
\hline
Summary of computational transaction \tabularnewline
Raw Input & view raw input (R code)  \tabularnewline
Raw Output & view raw output of R engine  \tabularnewline
Computing time & 7 seconds \tabularnewline
R Server & 'Sir Maurice George Kendall' @ kendall.wessa.net \tabularnewline
\hline
\end{tabular}
%Source: https://freestatistics.org/blog/index.php?pk=218819&T=0

[TABLE]
[ROW][C]Summary of computational transaction[/C][/ROW]
[ROW][C]Raw Input[/C][C]view raw input (R code) [/C][/ROW]
[ROW][C]Raw Output[/C][C]view raw output of R engine [/C][/ROW]
[ROW][C]Computing time[/C][C]7 seconds[/C][/ROW]
[ROW][C]R Server[/C][C]'Sir Maurice George Kendall' @ kendall.wessa.net[/C][/ROW]
[/TABLE]
Source: https://freestatistics.org/blog/index.php?pk=218819&T=0

Globally Unique Identifier (entire table): ba.freestatistics.org/blog/index.php?pk=218819&T=0

As an alternative you can also use a QR Code:

The GUIDs for individual cells are displayed in the table below:

Summary of computational transaction
Raw Input	view raw input (R code)
Raw Output	view raw output of R engine
Computing time	7 seconds
R Server	'Sir Maurice George Kendall' @ kendall.wessa.net

Estimation Results of Bootstrap
statistic	P1	P5	Q1	Estimate	Q3	P95	P99	S.D.	IQR
mean	4.5552	4.5787	4.6034	4.6667	4.7531	4.7802	4.8178	0.080059	0.14969
median	5	5	5	5	5	5	5	0	0
midrange	4	4	4	4	4	4.025	4.405	0.1118	0
mode	4	4	4	5	5	5	5	0.46169	1
mode k.dens	4.4144	4.4425	4.4907	4.5309	5	6	6	0.46722	0.50926

\begin{tabular}{lllllllll}
\hline
Estimation Results of Bootstrap \tabularnewline
statistic & P1 & P5 & Q1 & Estimate & Q3 & P95 & P99 & S.D. & IQR \tabularnewline
mean & 4.5552 & 4.5787 & 4.6034 & 4.6667 & 4.7531 & 4.7802 & 4.8178 & 0.080059 & 0.14969 \tabularnewline
median & 5 & 5 & 5 & 5 & 5 & 5 & 5 & 0 & 0 \tabularnewline
midrange & 4 & 4 & 4 & 4 & 4 & 4.025 & 4.405 & 0.1118 & 0 \tabularnewline
mode & 4 & 4 & 4 & 5 & 5 & 5 & 5 & 0.46169 & 1 \tabularnewline
mode k.dens & 4.4144 & 4.4425 & 4.4907 & 4.5309 & 5 & 6 & 6 & 0.46722 & 0.50926 \tabularnewline
\hline
\end{tabular}
%Source: https://freestatistics.org/blog/index.php?pk=218819&T=1

[TABLE]
[ROW][C]Estimation Results of Bootstrap[/C][/ROW]
[ROW][C]statistic[/C][C]P1[/C][C]P5[/C][C]Q1[/C][C]Estimate[/C][C]Q3[/C][C]P95[/C][C]P99[/C][C]S.D.[/C][C]IQR[/C][/ROW]
[ROW][C]mean[/C][C]4.5552[/C][C]4.5787[/C][C]4.6034[/C][C]4.6667[/C][C]4.7531[/C][C]4.7802[/C][C]4.8178[/C][C]0.080059[/C][C]0.14969[/C][/ROW]
[ROW][C]median[/C][C]5[/C][C]5[/C][C]5[/C][C]5[/C][C]5[/C][C]5[/C][C]5[/C][C]0[/C][C]0[/C][/ROW]
[ROW][C]midrange[/C][C]4[/C][C]4[/C][C]4[/C][C]4[/C][C]4[/C][C]4.025[/C][C]4.405[/C][C]0.1118[/C][C]0[/C][/ROW]
[ROW][C]mode[/C][C]4[/C][C]4[/C][C]4[/C][C]5[/C][C]5[/C][C]5[/C][C]5[/C][C]0.46169[/C][C]1[/C][/ROW]
[ROW][C]mode k.dens[/C][C]4.4144[/C][C]4.4425[/C][C]4.4907[/C][C]4.5309[/C][C]5[/C][C]6[/C][C]6[/C][C]0.46722[/C][C]0.50926[/C][/ROW]
[/TABLE]
Source: https://freestatistics.org/blog/index.php?pk=218819&T=1

Globally Unique Identifier (entire table): ba.freestatistics.org/blog/index.php?pk=218819&T=1

As an alternative you can also use a QR Code:

The GUIDs for individual cells are displayed in the table below:

Estimation Results of Bootstrap
statistic	P1	P5	Q1	Estimate	Q3	P95	P99	S.D.	IQR
mean	4.5552	4.5787	4.6034	4.6667	4.7531	4.7802	4.8178	0.080059	0.14969
median	5	5	5	5	5	5	5	0	0
midrange	4	4	4	4	4	4.025	4.405	0.1118	0
mode	4	4	4	5	5	5	5	0.46169	1
mode k.dens	4.4144	4.4425	4.4907	4.5309	5	6	6	0.46722	0.50926

Figure 1

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Figure 4

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Figure 5

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Figure 6

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Figure 7

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Figure 8

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Figure 9

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Figure 10

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Figure 11

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Parameters (Session):

par1 = 20 ; par2 = 5 ; par3 = 0 ; par4 = P1 P5 Q1 Q3 P95 P99 ;

Parameters (R input):

par1 = 20 ; par2 = 5 ; par3 = 0 ; par4 = P1 P5 Q1 Q3 P95 P99 ;

R code (references can be found in the software module):

par4 <- 'P1 P5 Q1 Q3 P95 P99'
par3 <- '0'
par2 <- '5'
par1 <- '200'
par1 <- as.numeric(par1)
par2 <- as.numeric(par2)
if (par3 == '0') bw <- NULL
if (par3 != '0') bw <- as.numeric(par3)
if (par1 < 10) par1 = 10
if (par1 > 5000) par1 = 5000
library(modeest)
library(lattice)
library(boot)
boot.stat <- function(s,i)
{
s.mean <- mean(s[i])
s.median <- median(s[i])
s.midrange <- (max(s[i]) + min(s[i])) / 2
s.mode <- mlv(s[i], method='mfv')$M
s.kernelmode <- mlv(s[i], method='kernel', bw=bw)$M
c(s.mean, s.median, s.midrange, s.mode, s.kernelmode)
}
(r <- boot(x,boot.stat, R=par1, stype='i'))
bitmap(file='plot1.png')
plot(r$t[,1],type='p',ylab='simulated values',main='Simulation of Mean')
grid()
dev.off()
bitmap(file='plot2.png')
plot(r$t[,2],type='p',ylab='simulated values',main='Simulation of Median')
grid()
dev.off()
bitmap(file='plot3.png')
plot(r$t[,3],type='p',ylab='simulated values',main='Simulation of Midrange')
grid()
dev.off()
bitmap(file='plot7.png')
plot(r$t[,4],type='p',ylab='simulated values',main='Simulation of Mode')
grid()
dev.off()
bitmap(file='plot8.png')
plot(r$t[,5],type='p',ylab='simulated values',main='Simulation of Mode of Kernel Density')
grid()
dev.off()
bitmap(file='plot4.png')
densityplot(~r$t[,1],col='black',main='Density Plot',xlab='mean')
dev.off()
bitmap(file='plot5.png')
densityplot(~r$t[,2],col='black',main='Density Plot',xlab='median')
dev.off()
bitmap(file='plot6.png')
densityplot(~r$t[,3],col='black',main='Density Plot',xlab='midrange')
dev.off()
bitmap(file='plot9.png')
densityplot(~r$t[,4],col='black',main='Density Plot',xlab='mode')
dev.off()
bitmap(file='plot10.png')
densityplot(~r$t[,5],col='black',main='Density Plot',xlab='mode of kernel dens.')
dev.off()
z <- data.frame(cbind(r$t[,1],r$t[,2],r$t[,3],r$t[,4],r$t[,5]))
colnames(z) <- list('mean','median','midrange','mode','mode k.dens')
bitmap(file='plot11.png')
boxplot(z,notch=TRUE,ylab='simulated values',main='Bootstrap Simulation - Central Tendency')
grid()
dev.off()
load(file='createtable')
a<-table.start()
a<-table.row.start(a)
a<-table.element(a,'Estimation Results of Bootstrap',10,TRUE)
a<-table.row.end(a)
if (par4 == 'P1 P5 Q1 Q3 P95 P99') {
myq.1 <- 0.01
myq.2 <- 0.05
myq.3 <- 0.95
myq.4 <- 0.99
myl.1 <- 'P1'
myl.2 <- 'P5'
myl.3 <- 'P95'
myl.4 <- 'P99'
}
if (par4 == 'P0.5 P2.5 Q1 Q3 P97.5 P99.5') {
myq.1 <- 0.005
myq.2 <- 0.025
myq.3 <- 0.975
myq.4 <- 0.995
myl.1 <- 'P0.5'
myl.2 <- 'P2.5'
myl.3 <- 'P97.5'
myl.4 <- 'P99.5'
}
if (par4 == 'P10 P20 Q1 Q3 P80 P90') {
myq.1 <- 0.10
myq.2 <- 0.20
myq.3 <- 0.80
myq.4 <- 0.90
myl.1 <- 'P10'
myl.2 <- 'P20'
myl.3 <- 'P80'
myl.4 <- 'P90'
}
a<-table.row.start(a)
a<-table.element(a,'statistic',header=TRUE)
a<-table.element(a,myl.1,header=TRUE)
a<-table.element(a,myl.2,header=TRUE)
a<-table.element(a,'Q1',header=TRUE)
a<-table.element(a,'Estimate',header=TRUE)
a<-table.element(a,'Q3',header=TRUE)
a<-table.element(a,myl.3,header=TRUE)
a<-table.element(a,myl.4,header=TRUE)
a<-table.element(a,'S.D.',header=TRUE)
a<-table.element(a,'IQR',header=TRUE)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'mean',header=TRUE)
q1 <- quantile(r$t[,1],0.25)[[1]]
q3 <- quantile(r$t[,1],0.75)[[1]]
p01 <- quantile(r$t[,1],myq.1)[[1]]
p05 <- quantile(r$t[,1],myq.2)[[1]]
p95 <- quantile(r$t[,1],myq.3)[[1]]
p99 <- quantile(r$t[,1],myq.4)[[1]]
a<-table.element(a,signif(p01,par2))
a<-table.element(a,signif(p05,par2))
a<-table.element(a,signif(q1,par2))
a<-table.element(a,signif(r$t0[1],par2))
a<-table.element(a,signif(q3,par2))
a<-table.element(a,signif(p95,par2))
a<-table.element(a,signif(p99,par2))
a<-table.element( a,signif( sqrt(var(r$t[,1])),par2 ) )
a<-table.element(a,signif(q3-q1,par2))
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'median',header=TRUE)
q1 <- quantile(r$t[,2],0.25)[[1]]
q3 <- quantile(r$t[,2],0.75)[[1]]
p01 <- quantile(r$t[,2],myq.1)[[1]]
p05 <- quantile(r$t[,2],myq.2)[[1]]
p95 <- quantile(r$t[,2],myq.3)[[1]]
p99 <- quantile(r$t[,2],myq.4)[[1]]
a<-table.element(a,signif(p01,par2))
a<-table.element(a,signif(p05,par2))
a<-table.element(a,signif(q1,par2))
a<-table.element(a,signif(r$t0[2],par2))
a<-table.element(a,signif(q3,par2))
a<-table.element(a,signif(p95,par2))
a<-table.element(a,signif(p99,par2))
a<-table.element(a,signif(sqrt(var(r$t[,2])),par2))
a<-table.element(a,signif(q3-q1,par2))
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'midrange',header=TRUE)
q1 <- quantile(r$t[,3],0.25)[[1]]
q3 <- quantile(r$t[,3],0.75)[[1]]
p01 <- quantile(r$t[,3],myq.1)[[1]]
p05 <- quantile(r$t[,3],myq.2)[[1]]
p95 <- quantile(r$t[,3],myq.3)[[1]]
p99 <- quantile(r$t[,3],myq.4)[[1]]
a<-table.element(a,signif(p01,par2))
a<-table.element(a,signif(p05,par2))
a<-table.element(a,signif(q1,par2))
a<-table.element(a,signif(r$t0[3],par2))
a<-table.element(a,signif(q3,par2))
a<-table.element(a,signif(p95,par2))
a<-table.element(a,signif(p99,par2))
a<-table.element(a,signif(sqrt(var(r$t[,3])),par2))
a<-table.element(a,signif(q3-q1,par2))
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'mode',header=TRUE)
q1 <- quantile(r$t[,4],0.25)[[1]]
q3 <- quantile(r$t[,4],0.75)[[1]]
p01 <- quantile(r$t[,4],myq.1)[[1]]
p05 <- quantile(r$t[,4],myq.2)[[1]]
p95 <- quantile(r$t[,4],myq.3)[[1]]
p99 <- quantile(r$t[,4],myq.4)[[1]]
a<-table.element(a,signif(p01,par2))
a<-table.element(a,signif(p05,par2))
a<-table.element(a,signif(q1,par2))
a<-table.element(a,signif(r$t0[4],par2))
a<-table.element(a,signif(q3,par2))
a<-table.element(a,signif(p95,par2))
a<-table.element(a,signif(p99,par2))
a<-table.element(a,signif(sqrt(var(r$t[,4])),par2))
a<-table.element(a,signif(q3-q1,par2))
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'mode k.dens',header=TRUE)
q1 <- quantile(r$t[,5],0.25)[[1]]
q3 <- quantile(r$t[,5],0.75)[[1]]
p01 <- quantile(r$t[,5],myq.1)[[1]]
p05 <- quantile(r$t[,5],myq.2)[[1]]
p95 <- quantile(r$t[,5],myq.3)[[1]]
p99 <- quantile(r$t[,5],myq.4)[[1]]
a<-table.element(a,signif(p01,par2))
a<-table.element(a,signif(p05,par2))
a<-table.element(a,signif(q1,par2))
a<-table.element(a,signif(r$t0[5],par2))
a<-table.element(a,signif(q3,par2))
a<-table.element(a,signif(p95,par2))
a<-table.element(a,signif(p99,par2))
a<-table.element(a,signif(sqrt(var(r$t[,5])),par2))
a<-table.element(a,signif(q3-q1,par2))
a<-table.row.end(a)
a<-table.end(a)
table.save(a,file='mytable.tab')

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Input Parameters & R Code