enrichit-package	enrichit-package
aggregate_enrichment	aggregate_enrichment
aggregate_omics	aggregate_omics
bayes_enrich	bayes_enrich
bayes_summary	bayes_summary
classify_omics_pattern	classify_omics_pattern
collapse_multilayer_scores	collapse_multilayer_scores
compareClusterResult-class	compareClusterResult-class
enrichit	enrichit-package
enrichit_params	enrichit_params
enrichResult-class	enrichResult-class
EXTID2NAME	EXTID2NAME
extract_mnsea_subnetwork	extract_mnsea_subnetwork
geneID	geneID
geneInCategory	geneInCategory
get_mnsea_contribution	get_mnsea_contribution
get_omics_contribution	get_omics_contribution
gsea	gsea
gseahResult-class	gseaResult-class
gseaResult-class	gseaResult-class
gseaScores	gseaScores
gsea_gson	gsea_gson
gsfilter	gsfilter
harmonize_ids	harmonize_ids
mnsea	mnsea
mnseaResult-class	mnseaResult-class
mnsea_gson	mnsea_gson
nsea	nsea
nseaResult-class	nseaResult-class
nsea_gson	nsea_gson
ora	ora
ora_gson	ora_gson
plot,compareClusterResult-method	compareClusterResult-class
prepare_multilayer_network	prepare_multilayer_network
prepare_network	prepare_network
propagate_multilayer	propagate_multilayer
select_features_for_ora	select_features_for_ora
setReadable	setReadable
show	show-methods
show,compareClusterResult-method	compareClusterResult-class
show,enrichResult-method	enrichResult-class
show,gseaResult-method	gseaResult-class
show,mnseaResult-method	show-methods
show,nseaResult-method	show-methods
summary	summary-methods
summary,compareClusterResult-method	compareClusterResult-class
summary,enrichResult-method	enrichResult-class
summary,gseaResult-method	gseaResult-class
