* using log directory 'd:/Rcompile/CRANpkg/local/4.7/biodosetools.Rcheck'
* using R Under development (unstable) (2026-06-29 r90199 ucrt)
* using platform: x86_64-w64-mingw32
* R was compiled by
    gcc.exe (GCC) 14.3.0
    GNU Fortran (GCC) 14.3.0
* running under: Windows Server 2022 x64 (build 20348)
* using session charset: UTF-8
* current time: 2026-07-01 13:04:29 UTC
* checking for file 'biodosetools/DESCRIPTION' ... OK
* this is package 'biodosetools' version '3.7.2'
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'biodosetools' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... [4s] OK
* checking whether the package can be loaded with stated dependencies ... [3s] OK
* checking whether the package can be unloaded cleanly ... [4s] OK
* checking whether the namespace can be loaded with stated dependencies ... [4s] OK
* checking whether the namespace can be unloaded cleanly ... [4s] OK
* checking loading without being on the library search path ... [4s] OK
* checking whether startup messages can be suppressed ... [3s] OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [19s] OK
* checking Rd files ... [1s] OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... [0s] OK
* checking LazyData ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking installed files from 'inst/doc' ... OK
* checking files in 'vignettes' ... OK
* checking examples ... [22s] OK
* checking for unstated dependencies in 'tests' ... OK
* checking tests ... [20s] ERROR
  Running 'testthat.R' [20s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(biodosetools)
  Loading required package: shiny
  Loading required package: golem
  > 
  > test_check("biodosetools")
  ! Problem with `glm()` -> constraint ML optimization will be used instead
  ! Problem with `glm()` -> constraint ML optimization will be used instead
  number of iterations= 43 
  Saving _problems/test-golem-recommended-49.R
  ! Problem with `glm()` -> constraint ML optimization will be used instead
  ! Problem with `glm()` -> constraint ML optimization will be used instead
  number of iterations= 43 
  ! Problem with `glm()` -> constraint ML optimization will be used instead
  ! Problem with `glm()` -> constraint ML optimization will be used instead
  [ FAIL 1 | WARN 1 | SKIP 1 | PASS 456 ]
  
  ══ Skipped tests (1) ═══════════════════════════════════════════════════════════
  • On CRAN (1): 'test-golem-recommended.R:71:5'
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Error ('test-golem-recommended.R:43:5'): golem-config works ─────────────────
  Error in `config::get(value = value, config = config, file = file, use_parent = use_parent)`: Attempt to assign nested list value from expression.
  Only directly assigned values can be used in expressions.
  Original Error:
  *  loadNamespace(x): there is no package called 'here'
  Backtrace:
      ▆
   1. ├─testthat::expect_false(...) at test-golem-recommended.R:43:5
   2. │ └─testthat::quasi_label(enquo(object), label)
   3. │   └─rlang::eval_bare(expr, quo_get_env(quo))
   4. └─biodosetools:::get_golem_config("app_prod", config = "dev", file = config_file)
   5.   └─config::get(value = value, config = config, file = file, use_parent = use_parent)
  
  [ FAIL 1 | WARN 1 | SKIP 1 | PASS 456 ]
  Error:
  ! Test failures.
  Execution halted
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... [63s] OK
* checking PDF version of manual ... [21s] OK
* checking HTML version of manual ... [12s] OK
* DONE
Status: 1 ERROR