A B C D E F G H I J L M N O P Q R S T U V W Y misc
| photobiology-package | photobiology: Photobiological Calculations |
| A.illuminant.spct | CIE A illuminant data |
| A2T | Convert absorbance into transmittance |
| A2T.default | Convert absorbance into transmittance |
| A2T.filter_mspct | Convert absorbance into transmittance |
| A2T.filter_spct | Convert absorbance into transmittance |
| A2T.numeric | Convert absorbance into transmittance |
| abs.generic_spct | Miscellaneous Mathematical Functions |
| absorbance | Absorbance |
| absorbance.default | Absorbance |
| absorbance.filter_mspct | Absorbance |
| absorbance.filter_spct | Absorbance |
| absorbance.object_mspct | Absorbance |
| absorbance.object_spct | Absorbance |
| absorptance | Absorptance |
| absorptance.default | Absorptance |
| absorptance.filter_mspct | Absorptance |
| absorptance.filter_spct | Absorptance |
| absorptance.object_mspct | Absorptance |
| absorptance.object_spct | Absorptance |
| acos.generic_spct | Trigonometric Functions |
| address2tb | Copy attributes from members of a generic_mspct |
| add_attr2tb | Copy attributes from members of a generic_mspct |
| Afr2T | Convert transmittance into absorptance. |
| Afr2T.default | Convert transmittance into absorptance. |
| Afr2T.filter_mspct | Convert transmittance into absorptance. |
| Afr2T.filter_spct | Convert transmittance into absorptance. |
| Afr2T.numeric | Convert transmittance into absorptance. |
| Afr2T.object_mspct | Convert transmittance into absorptance. |
| Afr2T.object_spct | Convert transmittance into absorptance. |
| Afr_as_default | Set spectral-data options |
| any2A | Convert filter quantities. |
| any2Afr | Convert filter quantities. |
| any2T | Convert filter quantities. |
| as.calibration_mspct | Coerce to a collection-of-spectra |
| as.calibration_mspct.calibration_spct | Coerce to a collection-of-spectra |
| as.calibration_mspct.data.frame | Coerce to a collection-of-spectra |
| as.calibration_mspct.default | Coerce to a collection-of-spectra |
| as.calibration_mspct.list | Coerce to a collection-of-spectra |
| as.calibration_mspct.matrix | Coerce to a collection-of-spectra |
| as.calibration_spct | Coerce to a spectrum |
| as.calibration_spct.default | Coerce to a spectrum |
| as.chroma_mspct | Coerce to a collection-of-spectra |
| as.chroma_mspct.chroma_spct | Coerce to a collection-of-spectra |
| as.chroma_mspct.data.frame | Coerce to a collection-of-spectra |
| as.chroma_mspct.default | Coerce to a collection-of-spectra |
| as.chroma_mspct.list | Coerce to a collection-of-spectra |
| as.chroma_spct | Coerce to a spectrum |
| as.chroma_spct.default | Coerce to a spectrum |
| as.cps_mspct | Coerce to a collection-of-spectra |
| as.cps_mspct.cps_spct | Coerce to a collection-of-spectra |
| as.cps_mspct.data.frame | Coerce to a collection-of-spectra |
| as.cps_mspct.default | Coerce to a collection-of-spectra |
| as.cps_mspct.list | Coerce to a collection-of-spectra |
| as.cps_mspct.matrix | Coerce to a collection-of-spectra |
| as.cps_spct | Coerce to a spectrum |
| as.cps_spct.default | Coerce to a spectrum |
| as.filter_mspct | Coerce to a collection-of-spectra |
| as.filter_mspct.data.frame | Coerce to a collection-of-spectra |
| as.filter_mspct.default | Coerce to a collection-of-spectra |
| as.filter_mspct.filter_spct | Coerce to a collection-of-spectra |
| as.filter_mspct.list | Coerce to a collection-of-spectra |
| as.filter_mspct.matrix | Coerce to a collection-of-spectra |
| as.filter_spct | Coerce or convert into a filter spectrum |
| as.filter_spct.default | Coerce or convert into a filter spectrum |
| as.filter_spct.solute_spct | Coerce or convert into a filter spectrum |
| as.generic_mspct | Coerce to a collection-of-spectra |
| as.generic_mspct.data.frame | Coerce to a collection-of-spectra |
| as.generic_mspct.default | Coerce to a collection-of-spectra |
| as.generic_mspct.generic_spct | Coerce to a collection-of-spectra |
| as.generic_mspct.list | Coerce to a collection-of-spectra |
| as.generic_mspct.matrix | Coerce to a collection-of-spectra |
| as.generic_spct | Coerce to a spectrum |
| as.generic_spct.default | Coerce to a spectrum |
| as.matrix-mspct | Coerce a collection of spectra into a matrix |
| as.matrix.generic_mspct | Coerce a collection of spectra into a matrix |
| as.object_mspct | Coerce to a collection-of-spectra |
| as.object_mspct.data.frame | Coerce to a collection-of-spectra |
| as.object_mspct.default | Coerce to a collection-of-spectra |
| as.object_mspct.list | Coerce to a collection-of-spectra |
| as.object_mspct.object_spct | Coerce to a collection-of-spectra |
| as.object_spct | Coerce to a spectrum |
| as.object_spct.default | Coerce to a spectrum |
| as.raw_mspct | Coerce to a collection-of-spectra |
| as.raw_mspct.data.frame | Coerce to a collection-of-spectra |
| as.raw_mspct.default | Coerce to a collection-of-spectra |
| as.raw_mspct.list | Coerce to a collection-of-spectra |
| as.raw_mspct.matrix | Coerce to a collection-of-spectra |
| as.raw_mspct.raw_spct | Coerce to a collection-of-spectra |
| as.raw_spct | Coerce to a spectrum |
| as.raw_spct.default | Coerce to a spectrum |
| as.reflector_mspct | Coerce to a collection-of-spectra |
| as.reflector_mspct.data.frame | Coerce to a collection-of-spectra |
| as.reflector_mspct.default | Coerce to a collection-of-spectra |
| as.reflector_mspct.list | Coerce to a collection-of-spectra |
| as.reflector_mspct.matrix | Coerce to a collection-of-spectra |
| as.reflector_mspct.reflector_spct | Coerce to a collection-of-spectra |
| as.reflector_spct | Coerce to a spectrum |
| as.reflector_spct.default | Coerce to a spectrum |
| as.response_mspct | Coerce to a collection-of-spectra |
| as.response_mspct.data.frame | Coerce to a collection-of-spectra |
| as.response_mspct.default | Coerce to a collection-of-spectra |
| as.response_mspct.list | Coerce to a collection-of-spectra |
| as.response_mspct.matrix | Coerce to a collection-of-spectra |
| as.response_mspct.response_spct | Coerce to a collection-of-spectra |
| as.response_spct | Coerce to a spectrum |
| as.response_spct.default | Coerce to a spectrum |
| as.solute_mspct | Coerce to a collection-of-spectra |
| as.solute_mspct.data.frame | Coerce to a collection-of-spectra |
| as.solute_mspct.default | Coerce to a collection-of-spectra |
| as.solute_mspct.list | Coerce to a collection-of-spectra |
| as.solute_mspct.matrix | Coerce to a collection-of-spectra |
| as.solute_mspct.solute_spct | Coerce to a collection-of-spectra |
| as.solute_spct | Coerce to a solute spectrum |
| as.solute_spct.default | Coerce to a solute spectrum |
| as.solute_spct.filter_spct | Coerce to a solute spectrum |
| as.source_mspct | Coerce to a collection-of-spectra |
| as.source_mspct.data.frame | Coerce to a collection-of-spectra |
| as.source_mspct.default | Coerce to a collection-of-spectra |
| as.source_mspct.list | Coerce to a collection-of-spectra |
| as.source_mspct.matrix | Coerce to a collection-of-spectra |
| as.source_mspct.source_spct | Coerce to a collection-of-spectra |
| as.source_spct | Coerce to a spectrum |
| as.source_spct.default | Coerce to a spectrum |
| asin.generic_spct | Trigonometric Functions |
| as_energy | Convert spectral photon irradiance into spectral energy irradiance |
| as_quantum | Convert spectral energy irradiance into spectral photon irradiance |
| as_quantum_mol | Convert spectral energy irradiance into spectral photon irradiance |
| atan.generic_spct | Trigonometric Functions |
| average_spct | Average spectral data. |
| A_as_default | Set spectral-data options |
| beesxyzCMF.spct | Honeybee xyz chromaticity colour matching function data |
| black_body.spct | Theoretical optical bodies |
| BSWF_used2tb | Copy attributes from members of a generic_mspct |
| c | Combine collections of spectra |
| c.generic_mspct | Combine collections of spectra |
| calc_filter_multipliers | Defunct functions and methods |
| calc_multipliers | Spectral weights |
| calc_source_output | Scaled and/or interpolated light-source spectral output |
| calibration_mspct | Collection-of-spectra constructor |
| calibration_spct | Spectral-object constructors |
| ccd.spct | Spectral response of a back-thinned CCD image sensor. |
| ceiling.generic_spct | Rounding of Numbers |
| checkTimeUnit | Check the "time.unit" attribute of an existing source_spct object |
| check_spct | Check validity of spectral objects |
| check_spct.calibration_spct | Check validity of spectral objects |
| check_spct.chroma_spct | Check validity of spectral objects |
| check_spct.cps_spct | Check validity of spectral objects |
| check_spct.default | Check validity of spectral objects |
| check_spct.filter_spct | Check validity of spectral objects |
| check_spct.generic_spct | Check validity of spectral objects |
| check_spct.object_spct | Check validity of spectral objects |
| check_spct.raw_spct | Check validity of spectral objects |
| check_spct.reflector_spct | Check validity of spectral objects |
| check_spct.response_spct | Check validity of spectral objects |
| check_spct.solute_spct | Check validity of spectral objects |
| check_spct.source_spct | Check validity of spectral objects |
| check_spectrum | Sanity check a spectrum |
| check_w.length | Sanity check of wavelengths (internal function). |
| chroma_mspct | Collection-of-spectra constructor |
| chroma_spct | Spectral-object constructors |
| ciev10.spct | Linear energy CIE 2008 luminous efficiency function 10 deg data |
| ciev2.spct | Linear energy CIE 2008 luminous efficiency function 2 deg data |
| ciexyzCC10.spct | CIE xyz chromaticity coordinates (CC) 10 deg data |
| ciexyzCC2.spct | CIE xyz chromaticity coordinates 2 deg data |
| ciexyzCMF10.spct | Linear energy CIE xyz colour matching function (CMF) 10 deg data |
| ciexyzCMF2.spct | Linear energy CIE xyz colour matching function (CMF) 2 deg data |
| class_spct | Query which is the class of a spectrum |
| clean | Clean (=replace) off-range values in a spectrum |
| clean.cps_mspct | Clean (=replace) off-range values in a spectrum |
| clean.cps_spct | Clean (=replace) off-range values in a spectrum |
| clean.default | Clean (=replace) off-range values in a spectrum |
| clean.filter_mspct | Clean (=replace) off-range values in a spectrum |
| clean.filter_spct | Clean (=replace) off-range values in a spectrum |
| clean.generic_mspct | Clean (=replace) off-range values in a spectrum |
| clean.generic_spct | Clean (=replace) off-range values in a spectrum |
| clean.object_mspct | Clean (=replace) off-range values in a spectrum |
| clean.object_spct | Clean (=replace) off-range values in a spectrum |
| clean.raw_mspct | Clean (=replace) off-range values in a spectrum |
| clean.raw_spct | Clean (=replace) off-range values in a spectrum |
| clean.reflector_mspct | Clean (=replace) off-range values in a spectrum |
| clean.reflector_spct | Clean (=replace) off-range values in a spectrum |
| clean.response_mspct | Clean (=replace) off-range values in a spectrum |
| clean.response_spct | Clean (=replace) off-range values in a spectrum |
| clean.solute_mspct | Clean (=replace) off-range values in a spectrum |
| clean.solute_spct | Clean (=replace) off-range values in a spectrum |
| clean.source_mspct | Clean (=replace) off-range values in a spectrum |
| clean.source_spct | Clean (=replace) off-range values in a spectrum |
| clear.spct | Theoretical spectrum of clear and apaque materials |
| clear_body.spct | Theoretical optical bodies |
| clip_wl | Clip head and/or tail of a spectrum |
| clip_wl.default | Clip head and/or tail of a spectrum |
| clip_wl.generic_mspct | Clip head and/or tail of a spectrum |
| clip_wl.generic_spct | Clip head and/or tail of a spectrum |
| clip_wl.list | Clip head and/or tail of a spectrum |
| clip_wl.waveband | Clip head and/or tail of a spectrum |
| collect2mspct | Form a new collection |
| color | Color of an object |
| color_of | Color of an object |
| color_of.default | Color of an object |
| color_of.list | Color of an object |
| color_of.numeric | Color of an object |
| color_of.source_mspct | Color of an object |
| color_of.source_spct | Color of an object |
| color_of.waveband | Color of an object |
| colour_of | Color of an object |
| comment2tb | Copy attributes from members of a generic_mspct |
| compare_spct | Coarse-grained comparison of two spectra |
| cone_fundamentals10.mspct | Ten-degree cone fundamentals |
| cone_fundamentals10.spct | Ten-degree cone fundamentals |
| convertTfrType | Convert the "Tfr.type" attribute |
| convertThickness | Convert the "thickness" attribute of an existing filter_spct object. |
| convertTimeUnit | Convert the "time.unit" attribute of an existing source_spct object |
| convolve_each | Convolve function for collections of spectra |
| copy_attributes | Copy attributes |
| copy_attributes.default | Copy attributes |
| copy_attributes.generic_mspct | Copy attributes |
| copy_attributes.generic_spct | Copy attributes |
| copy_attributes.waveband | Copy attributes |
| cos.generic_spct | Trigonometric Functions |
| cps2irrad | Conversion from counts per second to physical quantities |
| cps2Rfr | Conversion from counts per second to physical quantities |
| cps2Tfr | Conversion from counts per second to physical quantities |
| cps_mspct | Collection-of-spectra constructor |
| cps_spct | Spectral-object constructors |
| D2.UV586 | Data for typical calibration lamps |
| D2.UV653 | Data for typical calibration lamps |
| D2.UV654 | Data for typical calibration lamps |
| D2_spectrum | Calculate deuterium lamp output spectrum from fitted constants |
| D50.illuminant.spct | CIE D50 illuminant data |
| D65.illuminant.spct | CIE D65 illuminant data |
| defunct | Defunct functions and methods |
| despike | Remove spikes from spectrum |
| despike.cps_mspct | Remove spikes from spectrum |
| despike.cps_spct | Remove spikes from spectrum |
| despike.data.frame | Remove spikes from spectrum |
| despike.default | Remove spikes from spectrum |
| despike.filter_mspct | Remove spikes from spectrum |
| despike.filter_spct | Remove spikes from spectrum |
| despike.generic_mspct | Remove spikes from spectrum |
| despike.generic_spct | Remove spikes from spectrum |
| despike.numeric | Remove spikes from spectrum |
| despike.raw_mspct | Remove spikes from spectrum |
| despike.raw_spct | Remove spikes from spectrum |
| despike.reflector_mspct | Remove spikes from spectrum |
| despike.reflector_spct | Remove spikes from spectrum |
| despike.response_mspct | Remove spikes from spectrum |
| despike.response_spct | Remove spikes from spectrum |
| despike.solute_mspct | Remove spikes from spectrum |
| despike.solute_spct | Remove spikes from spectrum |
| despike.source_mspct | Remove spikes from spectrum |
| despike.source_spct | Remove spikes from spectrum |
| diffraction_double_slit | Diffraction |
| diffraction_single_slit | Diffraction |
| dim.generic_mspct | Dimensions of an Object |
| dim<-.generic_mspct | Dimensions of an Object |
| disable_check_spct | Enable or disable checks |
| div-.generic_spct | Arithmetic Operators |
| div_spectra | Divide two spectra, even if the wavelengths values differ |
| drop_user_cols | Drop user columns |
| drop_user_cols.calibration_spct | Drop user columns |
| drop_user_cols.chroma_spct | Drop user columns |
| drop_user_cols.cps_spct | Drop user columns |
| drop_user_cols.default | Drop user columns |
| drop_user_cols.filter_spct | Drop user columns |
| drop_user_cols.generic_mspct | Drop user columns |
| drop_user_cols.generic_spct | Drop user columns |
| drop_user_cols.object_spct | Drop user columns |
| drop_user_cols.raw_spct | Drop user columns |
| drop_user_cols.reflector_spct | Drop user columns |
| drop_user_cols.response_spct | Drop user columns |
| drop_user_cols.solute_spct | Drop user columns |
| drop_user_cols.source_spct | Drop user columns |
| e2q | Convert energy-based quantities into photon-based quantities. |
| e2q.default | Convert energy-based quantities into photon-based quantities. |
| e2q.response_mspct | Convert energy-based quantities into photon-based quantities. |
| e2q.response_spct | Convert energy-based quantities into photon-based quantities. |
| e2q.source_mspct | Convert energy-based quantities into photon-based quantities. |
| e2q.source_spct | Convert energy-based quantities into photon-based quantities. |
| e2qmol_multipliers | Calculate energy to quantum (mol) multipliers |
| e2quantum_multipliers | Calculate energy to quantum multipliers |
| enable_check_spct | Enable or disable checks |
| energy2wl | Wavelength conversions |
| energy_as_default | Set spectral-data options |
| energy_irradiance | Calculate (energy) irradiance from spectral irradiance |
| energy_ratio | Energy:energy ratio |
| eq_ratio | Energy:photon ratio |
| eq_ratio.default | Energy:photon ratio |
| eq_ratio.source_mspct | Energy:photon ratio |
| eq_ratio.source_spct | Energy:photon ratio |
| exp.generic_spct | Logarithms and Exponentials |
| expanse | Expanse |
| expanse.default | Expanse |
| expanse.generic_mspct | Expanse |
| expanse.generic_spct | Expanse |
| expanse.numeric | Expanse |
| expanse.waveband | Expanse |
| extend2extremes | Trim (or expand) head and/or tail of a spectrum |
| Extract | Extract or replace parts of a spectrum |
| Extract_mspct | Extract or replace members of a collection of spectra |
| e_fluence | Energy fluence |
| e_fluence.default | Energy fluence |
| e_fluence.source_mspct | Energy fluence |
| e_fluence.source_spct | Energy fluence |
| e_fraction | Energy:energy fraction |
| e_fraction.default | Energy:energy fraction |
| e_fraction.source_mspct | Energy:energy fraction |
| e_fraction.source_spct | Energy:energy fraction |
| e_irrad | Energy irradiance |
| e_irrad.default | Energy irradiance |
| e_irrad.source_mspct | Energy irradiance |
| e_irrad.source_spct | Energy irradiance |
| e_ratio | Energy:energy ratio |
| e_ratio.default | Energy:energy ratio |
| e_ratio.source_mspct | Energy:energy ratio |
| e_ratio.source_spct | Energy:energy ratio |
| e_response | Energy-based photo-response |
| e_response.default | Energy-based photo-response |
| e_response.response_mspct | Energy-based photo-response |
| e_response.response_spct | Energy-based photo-response |
| fast_color_of_wb | Color of an object |
| fast_color_of_wl | Color of an object |
| fast_wb2rect_spct | Create tagged spectrum from wavebands |
| FEL.BN.9101.165 | Data for typical calibration lamps |
| FEL_spectrum | Incandescent "FEL" lamp emission spectrum |
| filter_mspct | Collection-of-spectra constructor |
| filter_properties | Get the "filter.properties" attribute |
| filter_properties2tb | Copy attributes from members of a generic_mspct |
| filter_properties<- | Set the "filter.properties" attribute |
| filter_spct | Spectral-object constructors |
| findMultipleWl | Find repeated w.length values |
| find_peaks | Find peaks in a spectrum |
| find_spikes | Find spikes |
| find_wls | Find wavelength values in a spectrum |
| fit_peaks | Refine position and value of extremes by fitting |
| fit_valleys | Refine position and value of extremes by fitting |
| floor.generic_spct | Rounding of Numbers |
| fluence | Fluence |
| fluence.default | Fluence |
| fluence.source_mspct | Fluence |
| fluence.source_spct | Fluence |
| formatted_range | Compute range and format it |
| frequency2wl | Wavelength conversions |
| fscale | Rescale a spectrum using a summary function |
| fscale.cps_mspct | Rescale a spectrum using a summary function |
| fscale.cps_spct | Rescale a spectrum using a summary function |
| fscale.default | Rescale a spectrum using a summary function |
| fscale.filter_mspct | Rescale a spectrum using a summary function |
| fscale.filter_spct | Rescale a spectrum using a summary function |
| fscale.generic_mspct | Rescale a spectrum using a summary function |
| fscale.generic_spct | Rescale a spectrum using a summary function |
| fscale.raw_mspct | Rescale a spectrum using a summary function |
| fscale.raw_spct | Rescale a spectrum using a summary function |
| fscale.reflector_mspct | Rescale a spectrum using a summary function |
| fscale.reflector_spct | Rescale a spectrum using a summary function |
| fscale.response_mspct | Rescale a spectrum using a summary function |
| fscale.response_spct | Rescale a spectrum using a summary function |
| fscale.solute_mspct | Rescale a spectrum using a summary function |
| fscale.solute_spct | Rescale a spectrum using a summary function |
| fscale.source_mspct | Rescale a spectrum using a summary function |
| fscale.source_spct | Rescale a spectrum using a summary function |
| fshift | Shift the scale of a spectrum using a summary function |
| fshift.cps_mspct | Shift the scale of a spectrum using a summary function |
| fshift.cps_spct | Shift the scale of a spectrum using a summary function |
| fshift.default | Shift the scale of a spectrum using a summary function |
| fshift.filter_mspct | Shift the scale of a spectrum using a summary function |
| fshift.filter_spct | Shift the scale of a spectrum using a summary function |
| fshift.generic_mspct | Shift the scale of a spectrum using a summary function |
| fshift.generic_spct | Shift the scale of a spectrum using a summary function |
| fshift.raw_mspct | Shift the scale of a spectrum using a summary function |
| fshift.raw_spct | Shift the scale of a spectrum using a summary function |
| fshift.reflector_mspct | Shift the scale of a spectrum using a summary function |
| fshift.reflector_spct | Shift the scale of a spectrum using a summary function |
| fshift.response_mspct | Shift the scale of a spectrum using a summary function |
| fshift.response_spct | Shift the scale of a spectrum using a summary function |
| fshift.source_mspct | Shift the scale of a spectrum using a summary function |
| fshift.source_spct | Shift the scale of a spectrum using a summary function |
| f_mspct | Defunct functions and methods |
| generic_mspct | Collection-of-spectra constructor |
| generic_spct | Spectral-object constructors |
| geocode2tb | Copy attributes from members of a generic_mspct |
| getAfrType | Defunct functions and methods |
| getBSWFUsed | The "bswf.used" attribute |
| getFilterProperties | Get the "filter.properties" attribute |
| getFilterProperties.default | Get the "filter.properties" attribute |
| getFilterProperties.filter_spct | Get the "filter.properties" attribute |
| getFilterProperties.generic_mspct | Get the "filter.properties" attribute |
| getFilterProperties.summary_filter_spct | Get the "filter.properties" attribute |
| getHowMeasured | Get the "how.measured" attribute |
| getHowMeasured.data.frame | Get the "how.measured" attribute |
| getHowMeasured.default | Get the "how.measured" attribute |
| getHowMeasured.generic_mspct | Get the "how.measured" attribute |
| getHowMeasured.generic_spct | Get the "how.measured" attribute |
| getHowMeasured.summary_generic_spct | Get the "how.measured" attribute |
| getIdFactor | Get the "idfactor" attribute |
| getInstrDesc | Get the "instr.desc" attribute |
| getInstrSettings | Get the "instr.settings" attribute |
| getKType | Get the "K.type" attribute |
| getMspctVersion | Get the "mspct.version" attribute |
| getMultipleWl | Get the "multiple.wl" attribute |
| getNormalisation | Query the "normalized" and "normalization" attributes |
| getNormalised | Query the "normalized" and "normalization" attributes |
| getNormalization | Query the "normalized" and "normalization" attributes |
| getNormalized | Query the "normalized" and "normalization" attributes |
| getResponseType | Set the "response.type" attribute |
| getRfrType | The "Rfr.type" attribute |
| getScaled | Get the "scaled" attribute |
| getScaling | Get the "scaled" attribute |
| getSoluteProperties | Get the "solute.properties" attribute |
| getSoluteProperties.default | Get the "solute.properties" attribute |
| getSoluteProperties.solute_mspct | Get the "solute.properties" attribute |
| getSoluteProperties.solute_spct | Get the "solute.properties" attribute |
| getSoluteProperties.summary_solute_spct | Get the "solute.properties" attribute |
| getSpctVersion | Get the "spct.version" attribute |
| getTfrType | The "Tfr.type" attribute |
| getTimeUnit | Get the "time.unit" attribute of an existing source_spct object |
| getWhatMeasured | Get the "what.measured" attribute |
| getWhatMeasured.data.frame | Get the "what.measured" attribute |
| getWhatMeasured.default | Get the "what.measured" attribute |
| getWhatMeasured.generic_mspct | Get the "what.measured" attribute |
| getWhatMeasured.generic_spct | Get the "what.measured" attribute |
| getWhatMeasured.summary_generic_spct | Get the "what.measured" attribute |
| getWhenMeasured | Get the "when.measured" attribute |
| getWhenMeasured.data.frame | Get the "when.measured" attribute |
| getWhenMeasured.default | Get the "when.measured" attribute |
| getWhenMeasured.generic_mspct | Get the "when.measured" attribute |
| getWhenMeasured.generic_spct | Get the "when.measured" attribute |
| getWhenMeasured.summary_generic_spct | Get the "when.measured" attribute |
| getWhereMeasured | Get the "where.measured" attribute |
| getWhereMeasured.data.frame | Get the "where.measured" attribute |
| getWhereMeasured.default | Get the "where.measured" attribute |
| getWhereMeasured.generic_mspct | Get the "where.measured" attribute |
| getWhereMeasured.generic_spct | Get the "where.measured" attribute |
| getWhereMeasured.summary_generic_spct | Get the "where.measured" attribute |
| get_attributes | Get the metadata attributes |
| get_attributes.filter_spct | Get the metadata attributes |
| get_attributes.generic_spct | Get the metadata attributes |
| get_attributes.object_spct | Get the metadata attributes |
| get_attributes.reflector_spct | Get the metadata attributes |
| get_attributes.solute_spct | Get the metadata attributes |
| get_attributes.source_spct | Get the metadata attributes |
| get_attributes.waveband | Get the metadata attributes |
| get_peaks | Get peaks and valleys in a spectrum |
| get_valleys | Get peaks and valleys in a spectrum |
| green_leaf.spct | Green birch leaf reflectance. |
| head_tail | Return the First and Last Parts of an Object |
| head_tail.data.frame | Return the First and Last Parts of an Object |
| head_tail.default | Return the First and Last Parts of an Object |
| head_tail.ftable | Return the First and Last Parts of an Object |
| head_tail.function | Return the First and Last Parts of an Object |
| head_tail.matrix | Return the First and Last Parts of an Object |
| head_tail.table | Return the First and Last Parts of an Object |
| how_measured | Get the "how.measured" attribute |
| how_measured2tb | Copy attributes from members of a generic_mspct |
| how_measured<- | Set the "how.measured" attribute |
| id_factor | Get the "idfactor" attribute |
| id_factor<- | Set the "idfactor" attribute |
| illuminance | Irradiance |
| illuminance.default | Irradiance |
| illuminance.source_mspct | Irradiance |
| illuminance.source_spct | Irradiance |
| insert_hinges | Insert wavelength values into spectral data. |
| insert_spct_hinges | Insert new wavelength values into a spectrum |
| instr_desc2tb | Copy attributes from members of a generic_mspct |
| instr_descriptor | Get the "instr.desc" attribute |
| instr_descriptor<- | Set the "instr.desc" attribute |
| instr_settings | Get the "instr.settings" attribute |
| instr_settings2tb | Copy attributes from members of a generic_mspct |
| instr_settings<- | Set the "instr.settings" attribute |
| integrate_spct | Integrate spectral data. |
| integrate_xy | Gives irradiance from spectral irradiance. |
| interpolate_mspct | Map a spectrum to new wavelength values. |
| interpolate_spct | Map a spectrum to new wavelength values. |
| interpolate_spectrum | Calculate spectral values at a different set of wavelengths |
| interpolate_wl | Map spectra to new wavelength values. |
| interpolate_wl.default | Map spectra to new wavelength values. |
| interpolate_wl.generic_mspct | Map spectra to new wavelength values. |
| interpolate_wl.generic_spct | Map spectra to new wavelength values. |
| irrad | Irradiance |
| irrad.default | Irradiance |
| irrad.source_mspct | Irradiance |
| irrad.source_spct | Irradiance |
| irradiance | Photon or energy irradiance from spectral energy or photon irradiance. |
| is.any_mspct | Query class of spectrum objects |
| is.any_spct | Query class of spectrum objects |
| is.any_summary_spct | Query class of spectrum summary objects |
| is.calibration_mspct | Query class of spectrum objects |
| is.calibration_spct | Query class of spectrum objects |
| is.chroma_mspct | Query class of spectrum objects |
| is.chroma_spct | Query class of spectrum objects |
| is.cps_mspct | Query class of spectrum objects |
| is.cps_spct | Query class of spectrum objects |
| is.filter_mspct | Query class of spectrum objects |
| is.filter_spct | Query class of spectrum objects |
| is.generic_mspct | Query class of spectrum objects |
| is.generic_spct | Query class of spectrum objects |
| is.object_mspct | Query class of spectrum objects |
| is.object_spct | Query class of spectrum objects |
| is.old_spct | Query if an object has old class names |
| is.raw_mspct | Query class of spectrum objects |
| is.raw_spct | Query class of spectrum objects |
| is.reflector_mspct | Query class of spectrum objects |
| is.reflector_spct | Query class of spectrum objects |
| is.response_mspct | Query class of spectrum objects |
| is.response_spct | Query class of spectrum objects |
| is.solute_mspct | Query class of spectrum objects |
| is.solute_spct | Query class of spectrum objects |
| is.source_mspct | Query class of spectrum objects |
| is.source_spct | Query class of spectrum objects |
| is.summary_chroma_spct | Query class of spectrum summary objects |
| is.summary_cps_spct | Query class of spectrum summary objects |
| is.summary_filter_spct | Query class of spectrum summary objects |
| is.summary_generic_spct | Query class of spectrum summary objects |
| is.summary_object_spct | Query class of spectrum summary objects |
| is.summary_raw_spct | Query class of spectrum summary objects |
| is.summary_reflector_spct | Query class of spectrum summary objects |
| is.summary_response_spct | Query class of spectrum summary objects |
| is.summary_solute_spct | Query class of spectrum summary objects |
| is.summary_source_spct | Query class of spectrum summary objects |
| is.waveband | Query if it is a waveband |
| isValidInstrDesc | Check the "instr.desc" attribute |
| isValidInstrSettings | Check the "instr.settings" attribute |
| is_absorbance_based | Query if a spectrum contains absorbance or transmittance data |
| is_absorptance_based | Query if a spectrum contains absorbance or transmittance data |
| is_effective | Is an R object "effective" |
| is_effective.default | Is an R object "effective" |
| is_effective.generic_spct | Is an R object "effective" |
| is_effective.source_spct | Is an R object "effective" |
| is_effective.summary_generic_spct | Is an R object "effective" |
| is_effective.summary_source_spct | Is an R object "effective" |
| is_effective.waveband | Is an R object "effective" |
| is_energy_based | Query if a spectrum contains photon- or energy-based data. |
| is_mass_based | Query if a spectrum contains mole or mass based data |
| is_mole_based | Query if a spectrum contains mole or mass based data |
| is_normalised | Query whether a generic spectrum has been normalized. |
| is_normalized | Query whether a generic spectrum has been normalized. |
| is_photon_based | Query if a spectrum contains photon- or energy-based data. |
| is_scaled | Query whether a generic spectrum has been scaled |
| is_tagged | Query if a spectrum is tagged |
| is_transmittance_based | Query if a spectrum contains absorbance or transmittance data |
| join_mspct | Join all spectra in a collection |
| join_mspct.default | Join all spectra in a collection |
| join_mspct.filter_mspct | Join all spectra in a collection |
| join_mspct.generic_mspct | Join all spectra in a collection |
| join_mspct.object_mspct | Join all spectra in a collection |
| join_mspct.reflector_mspct | Join all spectra in a collection |
| join_mspct.response_mspct | Join all spectra in a collection |
| join_mspct.solute_mspct | Join all spectra in a collection |
| join_mspct.source_mspct | Join all spectra in a collection |
| labels | Find labels from "waveband" object |
| labels.generic_spct | Find labels from "waveband" object |
| labels.waveband | Find labels from "waveband" object |
| lat2tb | Copy attributes from members of a generic_mspct |
| Ler_leaf.spct | Green Arabidopsis leaf reflectance and transmittance. |
| Ler_leaf_rflt.spct | Green Arabidopsis leaf reflectance and transmittance. |
| Ler_leaf_trns.spct | Green Arabidopsis leaf reflectance and transmittance. |
| Ler_leaf_trns_i.spct | Green Arabidopsis leaf reflectance and transmittance. |
| log | Logarithms and Exponentials |
| log.generic_spct | Logarithms and Exponentials |
| log10.generic_spct | Logarithms and Exponentials |
| log2.generic_spct | Logarithms and Exponentials |
| lon2tb | Copy attributes from members of a generic_mspct |
| lonlat2tb | Copy attributes from members of a generic_mspct |
| make_var_labels | Column or variable labels |
| make_var_labels.calibration_spct | Column or variable labels |
| make_var_labels.chroma_spct | Column or variable labels |
| make_var_labels.cps_spct | Column or variable labels |
| make_var_labels.default | Column or variable labels |
| make_var_labels.filter_spct | Column or variable labels |
| make_var_labels.object_spct | Column or variable labels |
| make_var_labels.raw_spct | Column or variable labels |
| make_var_labels.reflector_spct | Column or variable labels |
| make_var_labels.response_spct | Column or variable labels |
| make_var_labels.solute_spct | Column or variable labels |
| make_var_labels.source_spct | Column or variable labels |
| mat2mspct | Coerce to a collection-of-spectra |
| MathFun | Miscellaneous Mathematical Functions |
| max | Wavelength maximum |
| max.generic_mspct | Wavelength maximum |
| max.generic_spct | Wavelength maximum |
| max.waveband | Wavelength maximum |
| merge2object_spct | Merge into object_spct |
| merge_attributes | Merge and copy attributes |
| merge_attributes.default | Merge and copy attributes |
| merge_attributes.generic_spct | Merge and copy attributes |
| midpoint | Midpoint |
| midpoint.default | Midpoint |
| midpoint.generic_mspct | Midpoint |
| midpoint.generic_spct | Midpoint |
| midpoint.numeric | Midpoint |
| midpoint.waveband | Midpoint |
| min | Wavelength minimum |
| min.generic_mspct | Wavelength minimum |
| min.generic_spct | Wavelength minimum |
| min.waveband | Wavelength minimum |
| minus-.generic_spct | Arithmetic Operators |
| mod-.generic_spct | Arithmetic Operators |
| msaply | Multi-spct transform methods |
| msdply | Multi-spct transform methods |
| mslply | Multi-spct transform methods |
| msmsply | Multi-spct transform methods |
| mspct2mat | Coerce a collection of spectra into a matrix |
| mspct_classes | Names of multi-spectra classes |
| multiple_wl | Get the "multiple.wl" attribute |
| multiple_wl<- | Set the "multiple.wl" attribute |
| mutate_mspct | Defunct functions and methods |
| na.exclude.chroma_spct | Handle Missing Values in Objects |
| na.exclude.cps_spct | Handle Missing Values in Objects |
| na.exclude.filter_spct | Handle Missing Values in Objects |
| na.exclude.generic_mspct | Handle Missing Values in Objects |
| na.exclude.generic_spct | Handle Missing Values in Objects |
| na.exclude.object_spct | Handle Missing Values in Objects |
| na.exclude.raw_spct | Handle Missing Values in Objects |
| na.exclude.reflector_spct | Handle Missing Values in Objects |
| na.exclude.response_spct | Handle Missing Values in Objects |
| na.exclude.solute_spct | Handle Missing Values in Objects |
| na.exclude.source_spct | Handle Missing Values in Objects |
| na.omit | Handle Missing Values in Objects |
| na.omit.chroma_spct | Handle Missing Values in Objects |
| na.omit.cps_spct | Handle Missing Values in Objects |
| na.omit.filter_spct | Handle Missing Values in Objects |
| na.omit.generic_mspct | Handle Missing Values in Objects |
| na.omit.generic_spct | Handle Missing Values in Objects |
| na.omit.object_spct | Handle Missing Values in Objects |
| na.omit.raw_spct | Handle Missing Values in Objects |
| na.omit.reflector_spct | Handle Missing Values in Objects |
| na.omit.response_spct | Handle Missing Values in Objects |
| na.omit.solute_spct | Handle Missing Values in Objects |
| na.omit.source_spct | Handle Missing Values in Objects |
| NDxI | Calculate a normalized difference. |
| new_waveband | Waveband constructor method |
| normalise | Normalize spectral data |
| normalised_diff_ind | Calculate a normalized difference. |
| normalization | Normalization of an R object |
| normalization.default | Normalization of an R object |
| normalization.generic_mspct | Normalization of an R object |
| normalization.generic_spct | Normalization of an R object |
| normalization.summary_generic_spct | Normalization of an R object |
| normalization.waveband | Normalization of an R object |
| normalize | Normalize spectral data |
| normalize.cps_mspct | Normalize spectral data |
| normalize.cps_spct | Normalize spectral data |
| normalize.default | Normalize spectral data |
| normalize.filter_mspct | Normalize spectral data |
| normalize.filter_spct | Normalize spectral data |
| normalize.generic_mspct | Normalize spectral data |
| normalize.generic_spct | Normalize spectral data |
| normalize.raw_mspct | Normalize spectral data |
| normalize.raw_spct | Normalize spectral data |
| normalize.reflector_mspct | Normalize spectral data |
| normalize.reflector_spct | Normalize spectral data |
| normalize.response_mspct | Normalize spectral data |
| normalize.response_spct | Normalize spectral data |
| normalize.solute_mspct | Normalize spectral data |
| normalize.solute_spct | Normalize spectral data |
| normalize.source_mspct | Normalize spectral data |
| normalize.source_spct | Normalize spectral data |
| normalized2tb | Copy attributes from members of a generic_mspct |
| normalized_diff_ind | Calculate a normalized difference. |
| normalized_diff_ind.default | Calculate a normalized difference. |
| normalized_diff_ind.generic_mspct | Calculate a normalized difference. |
| normalized_diff_ind.generic_spct | Calculate a normalized difference. |
| normalize_range_arg | Normalize a range argument into a true numeric range |
| object_mspct | Collection-of-spectra constructor |
| object_spct | Spectral-object constructors |
| opaque.spct | Theoretical spectrum of clear and apaque materials |
| oper_spectra | Binary operation on two spectra, even if the wavelengths values differ |
| peaks | Peaks or local maxima |
| peaks.cps_mspct | Peaks or local maxima |
| peaks.cps_spct | Peaks or local maxima |
| peaks.data.frame | Peaks or local maxima |
| peaks.default | Peaks or local maxima |
| peaks.filter_mspct | Peaks or local maxima |
| peaks.filter_spct | Peaks or local maxima |
| peaks.generic_mspct | Peaks or local maxima |
| peaks.generic_spct | Peaks or local maxima |
| peaks.numeric | Peaks or local maxima |
| peaks.raw_mspct | Peaks or local maxima |
| peaks.raw_spct | Peaks or local maxima |
| peaks.reflector_mspct | Peaks or local maxima |
| peaks.reflector_spct | Peaks or local maxima |
| peaks.response_mspct | Peaks or local maxima |
| peaks.response_spct | Peaks or local maxima |
| peaks.solute_mspct | Peaks or local maxima |
| peaks.solute_spct | Peaks or local maxima |
| peaks.source_mspct | Peaks or local maxima |
| peaks.source_spct | Peaks or local maxima |
| phenylalanine.spct | Molar spectral attenuation coefficient of phenylalanine |
| photobiology | photobiology: Photobiological Calculations |
| photodiode.spct | Spectral response of a GaAsP photodiode |
| photons_energy_ratio | Photon:energy ratio |
| photon_as_default | Set spectral-data options |
| photon_irradiance | Photon irradiance |
| photon_ratio | Photo:photon ratio |
| plus-.generic_spct | Arithmetic Operators |
| polyester.spct | Transmittance spectrum of plastic films |
| print.filter_properties | Print methods for metadata records |
| print.generic_mspct | Print spectral objects |
| print.generic_spct | Print spectral objects |
| print.instr_desc | Print methods for metadata records |
| print.instr_settings | Print methods for metadata records |
| print.metadata | Print methods for metadata records |
| print.solute_properties | Print methods for metadata records |
| print.summary_generic_mspct | Print spectral summary |
| print.summary_generic_spct | Print spectral summary |
| print.waveband | Print a "waveband" object |
| prod_spectra | Multiply two spectra, even if the wavelengths values differ |
| pull_sample | Random sample of spectra |
| pull_sample.default | Random sample of spectra |
| pull_sample.generic_mspct | Random sample of spectra |
| pull_sample.generic_spct | Random sample of spectra |
| pull_sample.list | Random sample of spectra |
| q2e | Convert photon-based quantities into energy-based quantities |
| q2e.default | Convert photon-based quantities into energy-based quantities |
| q2e.response_mspct | Convert photon-based quantities into energy-based quantities |
| q2e.response_spct | Convert photon-based quantities into energy-based quantities |
| q2e.source_mspct | Convert photon-based quantities into energy-based quantities |
| q2e.source_spct | Convert photon-based quantities into energy-based quantities |
| qe_ratio | Photon:energy ratio |
| qe_ratio.default | Photon:energy ratio |
| qe_ratio.source_mspct | Photon:energy ratio |
| qe_ratio.source_spct | Photon:energy ratio |
| quantum_as_default | Set spectral-data options |
| q_fluence | Photon fluence |
| q_fluence.default | Photon fluence |
| q_fluence.source_mspct | Photon fluence |
| q_fluence.source_spct | Photon fluence |
| q_fraction | Photon:photon fraction |
| q_fraction.default | Photon:photon fraction |
| q_fraction.source_mspct | Photon:photon fraction |
| q_fraction.source_spct | Photon:photon fraction |
| q_irrad | Photon irradiance |
| q_irrad.default | Photon irradiance |
| q_irrad.source_mspct | Photon irradiance |
| q_irrad.source_spct | Photon irradiance |
| q_ratio | Photon:photon ratio |
| q_ratio.default | Photon:photon ratio |
| q_ratio.source_mspct | Photon:photon ratio |
| q_ratio.source_spct | Photon:photon ratio |
| q_response | Photon-based photo-response |
| q_response.default | Photon-based photo-response |
| q_response.response_mspct | Photon-based photo-response |
| q_response.response_spct | Photon-based photo-response |
| r4p_pkgs | Packages in R for Photobiology suite |
| range | Wavelength range |
| range.generic_mspct | Wavelength range |
| range.generic_spct | Wavelength range |
| range.waveband | Wavelength range |
| raw_mspct | Collection-of-spectra constructor |
| raw_spct | Spectral-object constructors |
| rbindspct | Row-bind spectra |
| reflectance | Reflectance |
| reflectance.default | Reflectance |
| reflectance.object_mspct | Reflectance |
| reflectance.object_spct | Reflectance |
| reflectance.reflector_mspct | Reflectance |
| reflectance.reflector_spct | Reflectance |
| reflector_mspct | Collection-of-spectra constructor |
| reflector_spct | Spectral-object constructors |
| replace_bad_pixs | Replace bad pixels in a spectrum |
| response | Integrated response |
| response.default | Integrated response |
| response.response_mspct | Integrated response |
| response.response_spct | Integrated response |
| response_mspct | Collection-of-spectra constructor |
| response_spct | Spectral-object constructors |
| Rfr_fraction | reflectance:reflectance fraction |
| Rfr_fraction.default | reflectance:reflectance fraction |
| Rfr_fraction.reflector_mspct | reflectance:reflectance fraction |
| Rfr_fraction.reflector_spct | reflectance:reflectance fraction |
| Rfr_from_n | Reflectance at a planar boundary |
| Rfr_normdiff | reflectance:reflectance normalised difference |
| Rfr_normdiff.default | reflectance:reflectance normalised difference |
| Rfr_normdiff.reflector_mspct | reflectance:reflectance normalised difference |
| Rfr_normdiff.reflector_spct | reflectance:reflectance normalised difference |
| Rfr_p_from_n | Reflectance at a planar boundary |
| Rfr_ratio | reflectance:reflectance ratio |
| Rfr_ratio.default | reflectance:reflectance ratio |
| Rfr_ratio.reflector_mspct | reflectance:reflectance ratio |
| Rfr_ratio.reflector_spct | reflectance:reflectance ratio |
| Rfr_s_from_n | Reflectance at a planar boundary |
| Rfr_type2tb | Copy attributes from members of a generic_mspct |
| rgb_spct | RGB color values |
| rmDerivedMspct | Remove "generic_mspct" and derived class attributes. |
| rmDerivedSpct | Remove "generic_spct" and derived class attributes. |
| round | Rounding of Numbers |
| round.generic_spct | Rounding of Numbers |
| sample_mspct | Defunct functions and methods |
| sample_spct | Defunct functions and methods |
| scaled2tb | Copy attributes from members of a generic_mspct |
| select_spct_attributes | Merge user supplied attribute names with default ones |
| setAfrType | Defunct functions and methods |
| setBSWFUsed | The "bswf.used" attribute |
| setCalibrationSpct | Convert an R object into a spectrum object. |
| setChromaSpct | Convert an R object into a spectrum object. |
| setCpsSpct | Convert an R object into a spectrum object. |
| setFilterProperties | Set the "filter.properties" attribute |
| setFilterSpct | Convert an R object into a spectrum object. |
| setGenericSpct | Convert an R object into a spectrum object. |
| setHowMeasured | Set the "how.measured" attribute |
| setHowMeasured.data.frame | Set the "how.measured" attribute |
| setHowMeasured.default | Set the "how.measured" attribute |
| setHowMeasured.generic_mspct | Set the "how.measured" attribute |
| setHowMeasured.generic_spct | Set the "how.measured" attribute |
| setHowMeasured.summary_generic_spct | Set the "how.measured" attribute |
| setIdFactor | Set the "idfactor" attribute |
| setInstrDesc | Set the "instr.desc" attribute |
| setInstrSettings | Set the "instr.settings" attribute |
| setKType | Set the "K.type" attribute |
| setMultipleWl | Set the "multiple.wl" attribute |
| setNormalised | Set the "normalized" and "normalization" attributes |
| setNormalized | Set the "normalized" and "normalization" attributes |
| setObjectSpct | Convert an R object into a spectrum object. |
| setRawSpct | Convert an R object into a spectrum object. |
| setReflectorSpct | Convert an R object into a spectrum object. |
| setResponseSpct | Convert an R object into a spectrum object. |
| setResponseType | Set the "response.type" attribute |
| setRfrType | The "Rfr.type" attribute |
| setScaled | Set the "scaled" attribute |
| setScaled.default | Set the "scaled" attribute |
| setScaled.generic_mspct | Set the "scaled" attribute |
| setScaled.generic_spct | Set the "scaled" attribute |
| setScaled.summary_generic_spct | Set the "scaled" attribute |
| setSoluteProperties | Set the "solute.properties" attribute |
| setSoluteSpct | Convert an R object into a spectrum object. |
| setSourceSpct | Convert an R object into a spectrum object. |
| setTfrType | The "Tfr.type" attribute |
| setTimeUnit | Set the "time.unit" attribute of an existing source_spct object |
| setWhatMeasured | Set the "what.measured" attribute |
| setWhatMeasured.data.frame | Set the "what.measured" attribute |
| setWhatMeasured.default | Set the "what.measured" attribute |
| setWhatMeasured.generic_mspct | Set the "what.measured" attribute |
| setWhatMeasured.generic_spct | Set the "what.measured" attribute |
| setWhatMeasured.summary_generic_spct | Set the "what.measured" attribute |
| setWhenMeasured | Set the "when.measured" attribute |
| setWhenMeasured.data.frame | Set the "when.measured" attribute |
| setWhenMeasured.default | Set the "when.measured" attribute |
| setWhenMeasured.generic_mspct | Set the "when.measured" attribute |
| setWhenMeasured.generic_spct | Set the "when.measured" attribute |
| setWhenMeasured.summary_generic_spct | Set the "when.measured" attribute |
| setWhereMeasured | Set the "where.measured" attribute |
| setWhereMeasured.data.frame | Set the "where.measured" attribute |
| setWhereMeasured.default | Set the "where.measured" attribute |
| setWhereMeasured.generic_mspct | Set the "where.measured" attribute |
| setWhereMeasured.generic_spct | Set the "where.measured" attribute |
| setWhereMeasured.summary_generic_spct | Set the "where.measured" attribute |
| set_check_spct | Enable or disable checks |
| shared_member_class | Classes common to all collection members. |
| sign | Sign |
| sign.generic_spct | Sign |
| signif.generic_spct | Rounding of Numbers |
| sin.generic_spct | Trigonometric Functions |
| slash-.generic_spct | Arithmetic Operators |
| smooth_spct | Smooth a spectrum |
| smooth_spct.cps_spct | Smooth a spectrum |
| smooth_spct.default | Smooth a spectrum |
| smooth_spct.filter_spct | Smooth a spectrum |
| smooth_spct.generic_mspct | Smooth a spectrum |
| smooth_spct.reflector_spct | Smooth a spectrum |
| smooth_spct.response_spct | Smooth a spectrum |
| smooth_spct.solute_spct | Smooth a spectrum |
| smooth_spct.source_spct | Smooth a spectrum |
| solute_mspct | Collection-of-spectra constructor |
| solute_properties | Get the "solute.properties" attribute |
| solute_properties2tb | Copy attributes from members of a generic_mspct |
| solute_properties<- | Set the "solute.properties" attribute |
| solute_spct | Spectral-object constructors |
| source_mspct | Collection-of-spectra constructor |
| source_spct | Spectral-object constructors |
| spct_attr2tb | Copy attributes into a tibble |
| spct_attributes | Merge user supplied attribute names with default ones |
| spct_classes | Function returning a vector containing the names of spectra classes. |
| spct_metadata | Access metadata |
| spct_wide2long | Convert spectrum from wide to long form |
| spikes | Spikes |
| spikes.cps_mspct | Spikes |
| spikes.cps_spct | Spikes |
| spikes.data.frame | Spikes |
| spikes.default | Spikes |
| spikes.filter_mspct | Spikes |
| spikes.filter_spct | Spikes |
| spikes.generic_mspct | Spikes |
| spikes.generic_spct | Spikes |
| spikes.numeric | Spikes |
| spikes.raw_mspct | Spikes |
| spikes.raw_spct | Spikes |
| spikes.reflector_mspct | Spikes |
| spikes.reflector_spct | Spikes |
| spikes.response_mspct | Spikes |
| spikes.response_spct | Spikes |
| spikes.solute_mspct | Spikes |
| spikes.solute_spct | Spikes |
| spikes.source_mspct | Spikes |
| spikes.source_spct | Spikes |
| split2calibration_mspct | Convert a 'wide' or untidy data frame into a collection of spectra |
| split2cps_mspct | Convert a 'wide' or untidy data frame into a collection of spectra |
| split2filter_mspct | Convert a 'wide' or untidy data frame into a collection of spectra |
| split2mspct | Convert a 'wide' or untidy data frame into a collection of spectra |
| split2raw_mspct | Convert a 'wide' or untidy data frame into a collection of spectra |
| split2reflector_mspct | Convert a 'wide' or untidy data frame into a collection of spectra |
| split2response_mspct | Convert a 'wide' or untidy data frame into a collection of spectra |
| split2solute_mspct | Convert a 'wide' or untidy data frame into a collection of spectra |
| split2source_mspct | Convert a 'wide' or untidy data frame into a collection of spectra |
| split_bands | List-of-wavebands constructor |
| split_energy_irradiance | Energy irradiance for split spectrum regions |
| split_irradiance | Energy or photon irradiance for split spectrum regions |
| split_photon_irradiance | Photon irradiance for split spectrum regions |
| spread | Expanse |
| sqrt.generic_spct | Miscellaneous Mathematical Functions |
| stepsize | Stepsize |
| stepsize.default | Stepsize |
| stepsize.generic_mspct | Stepsize |
| stepsize.generic_spct | Stepsize |
| stepsize.numeric | Stepsize |
| strict_range_as_default | Set error reporting options |
| Subset | Subsetting spectra |
| subset.generic_spct | Subsetting spectra |
| subset2mspct | Convert 'long' or tidy spectral data into a collection of spectra |
| subt_spectra | Subtract two spectra |
| summary.generic_mspct | Summary of one or more spectra |
| summary.generic_spct | Summary of one or more spectra |
| summary_spct_classes | Function that returns a vector containing the names of spectral summary classes. |
| sum_spectra | Add two spectra |
| sun.daily.data | Daily solar spectral irradiance (simulated) |
| sun.daily.spct | Daily solar spectral irradiance (simulated) |
| sun.data | Solar spectral irradiance (simulated) |
| sun.spct | Solar spectral irradiance (simulated) |
| sun_daily.data | Daily solar spectral irradiance (simulated) |
| sun_daily.spct | Daily solar spectral irradiance (simulated) |
| sun_evening.mspct | Time series of solar spectral irradiance (measured) |
| sun_evening.spct | Time series of solar spectral irradiance (measured) |
| s_e_irrad2rgb | Spectral irradiance to rgb color conversion |
| s_mean | Mean from collection of spectra |
| s_mean.calibration_mspct | Mean from collection of spectra |
| s_mean.cps_mspct | Mean from collection of spectra |
| s_mean.default | Mean from collection of spectra |
| s_mean.filter_mspct | Mean from collection of spectra |
| s_mean.generic_spct | Mean from collection of spectra |
| s_mean.raw_mspct | Mean from collection of spectra |
| s_mean.reflector_mspct | Mean from collection of spectra |
| s_mean.response_mspct | Mean from collection of spectra |
| s_mean.source_mspct | Mean from collection of spectra |
| s_mean_se | Mean and standard error from collection of spectra |
| s_mean_se.calibration_mspct | Mean and standard error from collection of spectra |
| s_mean_se.cps_mspct | Mean and standard error from collection of spectra |
| s_mean_se.default | Mean and standard error from collection of spectra |
| s_mean_se.filter_mspct | Mean and standard error from collection of spectra |
| s_mean_se.generic_spct | Mean and standard error from collection of spectra |
| s_mean_se.raw_mspct | Mean and standard error from collection of spectra |
| s_mean_se.reflector_mspct | Mean and standard error from collection of spectra |
| s_mean_se.response_mspct | Mean and standard error from collection of spectra |
| s_mean_se.source_mspct | Mean and standard error from collection of spectra |
| s_mean_se_band | Mean plus and minus standard error from collection of spectra |
| s_mean_se_band.calibration_mspct | Mean plus and minus standard error from collection of spectra |
| s_mean_se_band.cps_mspct | Mean plus and minus standard error from collection of spectra |
| s_mean_se_band.default | Mean plus and minus standard error from collection of spectra |
| s_mean_se_band.filter_mspct | Mean plus and minus standard error from collection of spectra |
| s_mean_se_band.generic_spct | Mean plus and minus standard error from collection of spectra |
| s_mean_se_band.raw_mspct | Mean plus and minus standard error from collection of spectra |
| s_mean_se_band.reflector_mspct | Mean plus and minus standard error from collection of spectra |
| s_mean_se_band.response_mspct | Mean plus and minus standard error from collection of spectra |
| s_mean_se_band.source_mspct | Mean plus and minus standard error from collection of spectra |
| s_median | Median of a collection of spectra |
| s_median.calibration_mspct | Median of a collection of spectra |
| s_median.cps_mspct | Median of a collection of spectra |
| s_median.default | Median of a collection of spectra |
| s_median.filter_mspct | Median of a collection of spectra |
| s_median.generic_spct | Median of a collection of spectra |
| s_median.raw_mspct | Median of a collection of spectra |
| s_median.reflector_mspct | Median of a collection of spectra |
| s_median.response_mspct | Median of a collection of spectra |
| s_median.source_mspct | Median of a collection of spectra |
| s_prod | Product from collection of spectra |
| s_prod.calibration_mspct | Product from collection of spectra |
| s_prod.cps_mspct | Product from collection of spectra |
| s_prod.default | Product from collection of spectra |
| s_prod.filter_mspct | Product from collection of spectra |
| s_prod.generic_spct | Product from collection of spectra |
| s_prod.raw_mspct | Product from collection of spectra |
| s_prod.reflector_mspct | Product from collection of spectra |
| s_prod.response_mspct | Product from collection of spectra |
| s_prod.source_mspct | Product from collection of spectra |
| s_range | Range of a collection of spectra |
| s_range.calibration_mspct | Range of a collection of spectra |
| s_range.cps_mspct | Range of a collection of spectra |
| s_range.default | Range of a collection of spectra |
| s_range.filter_mspct | Range of a collection of spectra |
| s_range.generic_spct | Range of a collection of spectra |
| s_range.raw_mspct | Range of a collection of spectra |
| s_range.reflector_mspct | Range of a collection of spectra |
| s_range.response_mspct | Range of a collection of spectra |
| s_range.source_mspct | Range of a collection of spectra |
| s_sd | Standard Deviation of a collection of spectra |
| s_sd.calibration_mspct | Standard Deviation of a collection of spectra |
| s_sd.cps_mspct | Standard Deviation of a collection of spectra |
| s_sd.default | Standard Deviation of a collection of spectra |
| s_sd.filter_mspct | Standard Deviation of a collection of spectra |
| s_sd.generic_spct | Standard Deviation of a collection of spectra |
| s_sd.raw_mspct | Standard Deviation of a collection of spectra |
| s_sd.reflector_mspct | Standard Deviation of a collection of spectra |
| s_sd.response_mspct | Standard Deviation of a collection of spectra |
| s_sd.source_mspct | Standard Deviation of a collection of spectra |
| s_se | Standard Error of a collection of spectra |
| s_se.calibration_mspct | Standard Error of a collection of spectra |
| s_se.cps_mspct | Standard Error of a collection of spectra |
| s_se.default | Standard Error of a collection of spectra |
| s_se.filter_mspct | Standard Error of a collection of spectra |
| s_se.generic_spct | Standard Error of a collection of spectra |
| s_se.raw_mspct | Standard Error of a collection of spectra |
| s_se.reflector_mspct | Standard Error of a collection of spectra |
| s_se.response_mspct | Standard Error of a collection of spectra |
| s_se.source_mspct | Standard Error of a collection of spectra |
| s_sum | Sum from collection of spectra |
| s_sum.calibration_mspct | Sum from collection of spectra |
| s_sum.cps_mspct | Sum from collection of spectra |
| s_sum.default | Sum from collection of spectra |
| s_sum.filter_mspct | Sum from collection of spectra |
| s_sum.generic_spct | Sum from collection of spectra |
| s_sum.raw_mspct | Sum from collection of spectra |
| s_sum.reflector_mspct | Sum from collection of spectra |
| s_sum.response_mspct | Sum from collection of spectra |
| s_sum.source_mspct | Sum from collection of spectra |
| s_var | Variance of a collection of spectra |
| s_var.calibration_mspct | Variance of a collection of spectra |
| s_var.cps_mspct | Variance of a collection of spectra |
| s_var.default | Variance of a collection of spectra |
| s_var.filter_mspct | Variance of a collection of spectra |
| s_var.generic_spct | Variance of a collection of spectra |
| s_var.raw_mspct | Variance of a collection of spectra |
| s_var.reflector_mspct | Variance of a collection of spectra |
| s_var.response_mspct | Variance of a collection of spectra |
| s_var.source_mspct | Variance of a collection of spectra |
| T2A | Convert transmittance into absorbance. |
| T2A.default | Convert transmittance into absorbance. |
| T2A.filter_mspct | Convert transmittance into absorbance. |
| T2A.filter_spct | Convert transmittance into absorbance. |
| T2A.numeric | Convert transmittance into absorbance. |
| T2Afr | Convert transmittance into absorptance. |
| T2Afr.default | Convert transmittance into absorptance. |
| T2Afr.filter_mspct | Convert transmittance into absorptance. |
| T2Afr.filter_spct | Convert transmittance into absorptance. |
| T2Afr.numeric | Convert transmittance into absorptance. |
| T2Afr.object_mspct | Convert transmittance into absorptance. |
| T2Afr.object_spct | Convert transmittance into absorptance. |
| T2T | Defunct functions and methods |
| tag | Tag a spectrum |
| tag.default | Tag a spectrum |
| tag.generic_mspct | Tag a spectrum |
| tag.generic_spct | Tag a spectrum |
| tan.generic_spct | Trigonometric Functions |
| Tfr_as_default | Set spectral-data options |
| Tfr_fraction | transmittance:transmittance fraction |
| Tfr_fraction.default | transmittance:transmittance fraction |
| Tfr_fraction.filter_mspct | transmittance:transmittance fraction |
| Tfr_fraction.filter_spct | transmittance:transmittance fraction |
| Tfr_normdiff | transmittance:transmittance normalised difference |
| Tfr_normdiff.default | transmittance:transmittance normalised difference |
| Tfr_normdiff.filter_mspct | transmittance:transmittance normalised difference |
| Tfr_normdiff.filter_spct | transmittance:transmittance normalised difference |
| Tfr_ratio | transmittance:transmittance ratio |
| Tfr_ratio.default | transmittance:transmittance ratio |
| Tfr_ratio.filter_mspct | transmittance:transmittance ratio |
| Tfr_ratio.filter_spct | transmittance:transmittance ratio |
| Tfr_type2tb | Copy attributes from members of a generic_mspct |
| thin_wl | Thin the density of wavelength values |
| thin_wl.calibration_mspct | Thin the density of wavelength values |
| thin_wl.calibration_spct | Thin the density of wavelength values |
| thin_wl.chroma_mspct | Thin the density of wavelength values |
| thin_wl.chroma_spct | Thin the density of wavelength values |
| thin_wl.cps_spct | Thin the density of wavelength values |
| thin_wl.default | Thin the density of wavelength values |
| thin_wl.filter_spct | Thin the density of wavelength values |
| thin_wl.generic_mspct | Thin the density of wavelength values |
| thin_wl.generic_spct | Thin the density of wavelength values |
| thin_wl.object_spct | Thin the density of wavelength values |
| thin_wl.raw_spct | Thin the density of wavelength values |
| thin_wl.reflector_spct | Thin the density of wavelength values |
| thin_wl.response_spct | Thin the density of wavelength values |
| thin_wl.solute_spct | Thin the density of wavelength values |
| thin_wl.source_spct | Thin the density of wavelength values |
| times-.generic_spct | Arithmetic Operators |
| time_unit2tb | Copy attributes from members of a generic_mspct |
| transmittance | Transmittance |
| transmittance.default | Transmittance |
| transmittance.filter_mspct | Transmittance |
| transmittance.filter_spct | Transmittance |
| transmittance.object_mspct | Transmittance |
| transmittance.object_spct | Transmittance |
| Trig | Trigonometric Functions |
| trim2overlap | Trim (or expand) head and/or tail of a spectrum |
| trimInstrDesc | Trim the "instr.desc" attribute |
| trimInstrSettings | Trim the "instr.settings" attribute |
| trim_mspct | Trim (or expand) head and/or tail of a spectrum |
| trim_spct | Trim (or expand) head and/or tail of a spectrum |
| trim_tails | Trim (or expand) head and/or tail |
| trim_waveband | Trim (or expand) head and/or tail |
| trim_wl | Trim head and/or tail of a spectrum |
| trim_wl.default | Trim head and/or tail of a spectrum |
| trim_wl.generic_mspct | Trim head and/or tail of a spectrum |
| trim_wl.generic_spct | Trim head and/or tail of a spectrum |
| trim_wl.list | Trim head and/or tail of a spectrum |
| trim_wl.waveband | Trim head and/or tail of a spectrum |
| trunc.generic_spct | Rounding of Numbers |
| two_filters.mspct | Transmittance spectrum of plastic films |
| two_filters.spct | Transmittance spectrum of plastic films |
| two_sensors.mspct | Spectral response of two light sensors. |
| two_sensors.spct | Spectral response of two light sensors. |
| uncollect2spct | Extract all members from a collection |
| uncollect2spct.default | Extract all members from a collection |
| uncollect2spct.generic_mspct | Extract all members from a collection |
| unset_filter_qty_default | Set spectral-data options |
| unset_radiation_unit_default | Set spectral-data options |
| unset_user_defaults | Set spectral-data options |
| untag | Remove tags |
| untag.default | Remove tags |
| untag.generic_mspct | Remove tags |
| untag.generic_spct | Remove tags |
| upgrade_spct | Upgrade one spectral object |
| upgrade_spectra | Upgrade one or more spectral objects |
| use_cached_mult_as_default | Set computation options |
| using_A | Use photobiology options |
| using_Afr | Use photobiology options |
| using_energy | Use photobiology options |
| using_photon | Use photobiology options |
| using_quantum | Use photobiology options |
| using_Tfr | Use photobiology options |
| valleys | Valleys or local minima |
| valleys.cps_mspct | Valleys or local minima |
| valleys.cps_spct | Valleys or local minima |
| valleys.data.frame | Valleys or local minima |
| valleys.default | Valleys or local minima |
| valleys.filter_mspct | Valleys or local minima |
| valleys.filter_spct | Valleys or local minima |
| valleys.generic_mspct | Valleys or local minima |
| valleys.generic_spct | Valleys or local minima |
| valleys.numeric | Valleys or local minima |
| valleys.raw_mspct | Valleys or local minima |
| valleys.raw_spct | Valleys or local minima |
| valleys.reflector_mspct | Valleys or local minima |
| valleys.reflector_spct | Valleys or local minima |
| valleys.response_mspct | Valleys or local minima |
| valleys.response_spct | Valleys or local minima |
| valleys.solute_mspct | Valleys or local minima |
| valleys.solute_spct | Valleys or local minima |
| valleys.source_mspct | Valleys or local minima |
| valleys.source_spct | Valleys or local minima |
| verbose_as_default | Set error reporting options |
| v_insert_hinges | Insert spectral data values at new wavelength values. |
| v_replace_hinges | Overwrite spectral data values at existing wavelength values. |
| water.spct | Molar spectral attenuation coefficient of water |
| waveband | Waveband constructor method |
| waveband_ratio | Photon or energy ratio |
| wavenumber2wl | Wavelength conversions |
| wb2rect_spct | Create tagged spectrum from wavebands |
| wb2spct | Create spectrum from wavebands |
| wb2tagged_spct | Create tagged spectrum from wavebands |
| wb_trim_as_default | Set computation options |
| what_measured | Get the "what.measured" attribute |
| what_measured2tb | Copy attributes from members of a generic_mspct |
| what_measured<- | Set the "what.measured" attribute |
| when_measured | Get the "when.measured" attribute |
| when_measured2tb | Copy attributes from members of a generic_mspct |
| when_measured<- | Set the "when.measured" attribute |
| where_measured | Get the "where.measured" attribute |
| where_measured<- | Set the "where.measured" attribute |
| white_body.spct | Theoretical optical bodies |
| white_led.cps_spct | White led bulb spectrum |
| white_led.raw_spct | White led bulb spectrum |
| white_led.source_spct | White led bulb spectrum |
| wl2energy | Wavelength conversions |
| wl2frequency | Wavelength conversions |
| wl2wavenumber | Wavelength conversions |
| wls_at_target | Find wavelengths values corresponding to a target spectral value |
| wls_at_target.cps_spct | Find wavelengths values corresponding to a target spectral value |
| wls_at_target.data.frame | Find wavelengths values corresponding to a target spectral value |
| wls_at_target.default | Find wavelengths values corresponding to a target spectral value |
| wls_at_target.filter_spct | Find wavelengths values corresponding to a target spectral value |
| wls_at_target.generic_mspct | Find wavelengths values corresponding to a target spectral value |
| wls_at_target.generic_spct | Find wavelengths values corresponding to a target spectral value |
| wls_at_target.raw_spct | Find wavelengths values corresponding to a target spectral value |
| wls_at_target.reflector_spct | Find wavelengths values corresponding to a target spectral value |
| wls_at_target.response_spct | Find wavelengths values corresponding to a target spectral value |
| wls_at_target.solute_spct | Find wavelengths values corresponding to a target spectral value |
| wls_at_target.source_spct | Find wavelengths values corresponding to a target spectral value |
| wl_expanse | Expanse |
| wl_max | Wavelength maximum |
| wl_midpoint | Midpoint |
| wl_min | Wavelength minimum |
| wl_range | Wavelength range |
| wl_stepsize | Stepsize |
| w_length2rgb | Wavelength to rgb color conversion |
| w_length_range2rgb | Wavelength range to rgb color conversion |
| yellow_gel.spct | Transmittance spectrum of plastic films |
| $<-.generic_mspct | Extract or replace members of a collection of spectra |
| $<-.generic_spct | Extract or replace parts of a spectrum |
| %%.generic_spct | Arithmetic Operators |
| %/%.generic_spct | Arithmetic Operators |
| *.generic_spct | Arithmetic Operators |
| +.generic_spct | Arithmetic Operators |
| -.generic_spct | Arithmetic Operators |
| /.generic_spct | Arithmetic Operators |
| [.chroma_spct | Extract or replace parts of a spectrum |
| [.cps_spct | Extract or replace parts of a spectrum |
| [.filter_spct | Extract or replace parts of a spectrum |
| [.generic_mspct | Extract or replace members of a collection of spectra |
| [.generic_spct | Extract or replace parts of a spectrum |
| [.object_spct | Extract or replace parts of a spectrum |
| [.raw_spct | Extract or replace parts of a spectrum |
| [.reflector_spct | Extract or replace parts of a spectrum |
| [.response_spct | Extract or replace parts of a spectrum |
| [.solute_spct | Extract or replace parts of a spectrum |
| [.source_spct | Extract or replace parts of a spectrum |
| [<-.generic_mspct | Extract or replace members of a collection of spectra |
| [<-.generic_spct | Extract or replace parts of a spectrum |
| [[<-.generic_mspct | Extract or replace members of a collection of spectra |
| ^.generic_spct | Arithmetic Operators |