Basic Module Functions

Documentation for package ‘moduleColor’ version 1.8-4

moduleColor-package	Basic Module Functions
checkSets	Check structure and retrieve sizes of a group of datasets.
collectGarbage	Iterative garbage collection.
consensusMEDissimilarity	Consensus dissimilarity of module eigengenes.
consensusOrderMEs	Put close eigenvectors next to each other in several sets.
fixDataStructure	Put single-set data into a form useful for multiset calculations.
labels2colors	Convert numerical labels to colors.
mergeCloseModules	Merge close modules of gene expression data.
moduleColor	Basic Module Functions
moduleColor.getMEprefix	Get the prefix used to label module eigengenes.
moduleColor.revisionDate	Get the last revision date of the package.
moduleColor.setMEprefix	Set the prefix used to label module eigengenes.
moduleColor.version	Get the version number of the package.
moduleEigengenes	Calculate module eigengenes.
moduleNumber	Fixed-height cut of a dendrogram.
multiSetMEs	Calculate module eigengenes.
normalizeLabels	Transform numerical labels into normal order.
orderMEs	Put close eigenvectors next to each other
plotHclustColors	Plot color rows corresponding to modules
removeGreyME	Removes the grey eigengene from a given collection of eigengenes.
standardColors	Colors this library uses for labeling modules.