| depmixS4-package | depmixS4 provides classes for specifying and fitting hidden Markov models |
| balance | Balance Scale Data |
| BINOMresponse | Response models currently implemented in depmix. |
| confint | Parameter standard errors |
| confint-method | Parameter standard errors |
| depmix | Dependent Mixture Model Specifiction |
| depmix-class | Class "depmix" |
| depmix-method | Dependent Mixture Model Specifiction |
| depmix-methods | 'depmix' and 'mix' methods. |
| depmix.fit | Fit 'depmix' or 'mix' models |
| depmix.fitted | Class "depmix.fitted" (and "depmix.fitted.classLik") |
| depmix.fitted-class | Class "depmix.fitted" (and "depmix.fitted.classLik") |
| depmix.fitted.classLik | Class "depmix.fitted" (and "depmix.fitted.classLik") |
| depmix.fitted.classLik-class | Class "depmix.fitted" (and "depmix.fitted.classLik") |
| depmix.sim | Class "depmix.sim" |
| depmix.sim-class | Class "depmix.sim" |
| depmixS4 | depmixS4 provides classes for specifying and fitting hidden Markov models |
| em.control | Control parameters for the EM algorithm |
| fit | Fit 'depmix' or 'mix' models |
| fit-method | Fit 'depmix' or 'mix' models |
| formatperc | Format percentage for level in printing confidence interval |
| forwardbackward | Forward and backward variables |
| forwardbackward-method | Forward and backward variables |
| freepars | 'depmix' and 'mix' methods. |
| freepars-method | 'depmix' and 'mix' methods. |
| GAMMAresponse | Response models currently implemented in depmix. |
| getdf | Methods for creating depmix response models |
| getdf-method | Methods for creating depmix response models |
| getdf-method | Methods for creating depmix transition and initial probability models |
| getmodel | 'depmix' and 'mix' methods. |
| getmodel-method | 'depmix' and 'mix' methods. |
| getpars | 'depmix' and 'mix' methods. |
| getpars-method | 'depmix' and 'mix' methods. |
| GLMresponse | Methods for creating depmix response models |
| GLMresponse-class | Class "GLMresponse" and class "transInit" |
| GLMresponse-method | Methods for creating depmix response models |
| hessian | Parameter standard errors |
| hessian-method | Parameter standard errors |
| llratio | Log likelihood ratio test on two fitted models |
| logLik | 'depmix' and 'mix' methods. |
| logLik-method | 'depmix' and 'mix' methods. |
| loglikelihoodratio | Log likelihood ratio test on two fitted models |
| makeDepmix | Dependent Mixture Model Specifiction: full control and adding response models |
| makeMix | Dependent Mixture Model Specifiction: full control and adding response models |
| mix | Mixture Model Specifiction |
| mix-class | Class "mix" |
| mix-method | Mixture Model Specifiction |
| mix.fit | Fit 'depmix' or 'mix' models |
| mix.fitted-class | Class "mix.fitted" (and "mix.fitted.classLik") |
| mix.fitted.classLik-class | Class "mix.fitted" (and "mix.fitted.classLik") |
| mix.sim | Class "mix.sim" |
| mix.sim-class | Class "mix.sim" |
| MULTINOMresponse | Response models currently implemented in depmix. |
| multistart | Methods to fit a (dep-)mix model using multiple sets of starting values |
| multistart-method | Methods to fit a (dep-)mix model using multiple sets of starting values |
| MVNresponse | Response models currently implemented in depmix. |
| MVNresponse-class | Class "GLMresponse" and class "transInit" |
| nobs | 'depmix' and 'mix' methods. |
| nobs-method | 'depmix' and 'mix' methods. |
| NORMresponse | Response models currently implemented in depmix. |
| npar | 'depmix' and 'mix' methods. |
| npar-method | 'depmix' and 'mix' methods. |
| nresp | Class "depmix" |
| nresp-method | Class "depmix" |
| nresp-method | Class "depmix.sim" |
| nresp-method | Class "mix" |
| nresp-method | Class "mix.sim" |
| nstates | Class "depmix" |
| nstates-method | Class "depmix" |
| nstates-method | Class "depmix.sim" |
| nstates-method | Class "mix" |
| nstates-method | Class "mix.sim" |
| ntimes | Class "depmix" |
| ntimes-method | Class "depmix" |
| ntimes-method | Class "depmix.sim" |
| ntimes-method | Class "mix" |
| ntimes-method | Class "mix.sim" |
| POISSONresponse | Response models currently implemented in depmix. |
| posterior | Posterior state/class probabilities and classification |
| posterior-method | Posterior state/class probabilities and classification |
| response-class | Class "response" |
| response-classes | Class "GLMresponse" and class "transInit" |
| responses | Response models currently implemented in depmix. |
| setpars | 'depmix' and 'mix' methods. |
| setpars-method | 'depmix' and 'mix' methods. |
| show | Dependent Mixture Model Specifiction |
| show-method | Methods for creating depmix response models |
| show-method | Dependent Mixture Model Specifiction |
| show-method | Fit 'depmix' or 'mix' models |
| show-method | Log likelihood ratio test on two fitted models |
| show-method | Mixture Model Specifiction |
| show-method | Response models currently implemented in depmix. |
| simulate | Methods to simulate from (dep-)mix models |
| simulate-method | Methods to simulate from (dep-)mix models |
| sp500 | Standard & Poor's 500 index |
| speed | Speed Accuracy Switching Data |
| standardError | Parameter standard errors |
| standardError-method | Parameter standard errors |
| stationary | Compute the stationary distribution of a transition probability matrix. |
| summary | Dependent Mixture Model Specifiction |
| summary-method | Dependent Mixture Model Specifiction |
| summary-method | Fit 'depmix' or 'mix' models |
| summary-method | Mixture Model Specifiction |
| transInit | Methods for creating depmix transition and initial probability models |
| transInit-class | Class "GLMresponse" and class "transInit" |
| transInit-method | Methods for creating depmix transition and initial probability models |
| vcov | Parameter standard errors |
| vcov-method | Parameter standard errors |
| viterbi | Viterbi algorithm for decoding the most likely state sequence |
| viterbi.fb | Viterbi algorithm for decoding the most likely state sequence |
| viterbi2 | Viterbi algorithm for decoding the most likely state sequence |