Landscape Construction and Simulation for Ising Networks
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Documentation for package ‘Isinglandr’ version 0.1.1
Help Pages
| all_thresholds | Control Functions to Specify the Varying Parameters for an Ising Grid. |
| autolayer.resilience | Get ggplot2 layers of resilience metrics to add to the landscape plots |
| autolayer.resilience_2d_Isingland | Get ggplot2 layers of resilience metrics to add to the landscape plots |
| beta_list | Control Functions to Specify the Varying Parameters for an Ising Grid. |
| calculate_barrier.2d_Isingland | Calculate energy barrier for Ising landscapes |
| calculate_barrier.2d_Isingland_matrix | Calculate energy barrier for Ising landscapes |
| calculate_barrier.Isingland | Calculate energy barrier for Ising landscapes |
| calculate_resilience | Calculate the resilience values for Ising landscapes |
| calculate_resilience.2d_Isingland | Calculate the resilience values for Ising landscapes |
| calculate_resilience.2d_Isingland_matrix | Calculate the resilience values for Ising landscapes |
| chain_simulate_Isingland | Make Ising chains from (a series of) Ising grid(s) and perform a chain simulation. |
| make_2d_Isingland | Make a 2D landscape for an Ising network |
| make_2d_Isingland_matrix | Make a matrix of landscapes for multiple Ising networks |
| make_3d_Isingland | Make a 3D landscape for an Ising network |
| make_Ising_chain | Make Ising chains from (a series of) Ising grid(s) and perform a chain simulation. |
| make_Ising_grid | Make a Grid to Specify Multiple Ising Networks |
| make_Ising_grid-control-functions | Control Functions to Specify the Varying Parameters for an Ising Grid. |
| MDDConnectivity | Estimation data for the Ising network of major depressive disorder |
| MDDNetwork | Estimation data for the Ising network of major depressive disorder |
| MDDThresholds | Estimation data for the Ising network of major depressive disorder |
| print.barrier_2d_Isingland | Calculate energy barrier for Ising landscapes |
| shiny_Isingland_MDD | A shiny app that shows the landscape for the Ising network of major depressive disorder |
| simulate_Isingland | Simulate a 2D Ising landscape |
| simulate_Isingland.2d_Isingland | Simulate a 2D Ising landscape |
| simulate_Isingland.2d_Isingland_matrix | Simulate a 2D Ising landscape |
| single_threshold | Control Functions to Specify the Varying Parameters for an Ising Grid. |
| single_wei | Control Functions to Specify the Varying Parameters for an Ising Grid. |
| summary.barrier_2d_Isingland | Calculate energy barrier for Ising landscapes |
| summary.barrier_2d_Isingland_matrix | Calculate energy barrier for Ising landscapes |
| whole_weiadj | Control Functions to Specify the Varying Parameters for an Ising Grid. |