Task-Oriented Cheminformatics in R Using 'RDKit' via 'Python'


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Documentation for package ‘rdkitpyr’ version 0.2.1

Help Pages

.IsRdkitAvailable Check whether RDKit is available
CalculateAllDescriptors Calculate all RDKit molecular descriptors
CalculateExactMass Calculate the exact mass of molecules
CalculateMaccsFingerprints Calculate MACCS fingerprints for a set of molecules
CalculateMolecularWeight Calculate the average molecular weight of molecules
CalculateMorganFingerprints Calculate Morgan fingerprints for a set of molecules
CalculateRdkitFingerprints Calculate RDKit topological fingerprints for a set of molecules
ConvertToInchi Convert molecules to InChI strings
ConvertToInchikey Convert molecules to InChIKey strings
ConvertToSmiles Convert molecules to SMILES strings
GetPythonInfo Get information about the currently used Python environment
ParseMolecules Parse SMILES and InChI strings into RDKit Mol objects
test_compounds Test compounds