| PBSadmb-package | PBS ADMB Package |
| .PBSadmbEnv | PBSadmb Environment |
| .win.appendLog | GUI Windows Wrappers |
| .win.checkADopts | GUI Windows Wrappers |
| .win.checkADpath | GUI Windows Wrappers |
| .win.checkPrefix | GUI Windows Wrappers |
| .win.cleanAD | GUI Windows Wrappers |
| .win.compAD | GUI Windows Wrappers |
| .win.convAD | GUI Windows Wrappers |
| .win.editAD | GUI Windows Wrappers |
| .win.editPLT | GUI Windows Wrappers |
| .win.findClean | GUI Windows Wrappers |
| .win.findTPL | GUI Windows Wrappers |
| .win.linkAD | GUI Windows Wrappers |
| .win.makeAD | GUI Windows Wrappers |
| .win.plotMC | GUI Windows Wrappers |
| .win.readADopts | GUI Windows Wrappers |
| .win.readADpaths | GUI Windows Wrappers |
| .win.readRep | GUI Windows Wrappers |
| .win.run | GUI Windows Wrappers |
| .win.runAD | GUI Windows Wrappers |
| .win.runMC | GUI Windows Wrappers |
| .win.saveADpaths | GUI Windows Wrappers |
| .win.setADpath | GUI Windows Wrappers |
| .win.setADver | GUI Windows Wrappers |
| .win.showADargs | GUI Windows Wrappers |
| .win.showGUIargs | GUI Windows Wrappers |
| .win.startLog | GUI Windows Wrappers |
| .win.suggestPath | GUI Windows Wrappers |
| .win.viewCode | GUI Windows Wrappers |
| .win.viewRep | GUI Windows Wrappers |
| .win.writeADopts | GUI Windows Wrappers |
| admb | Start the PBSadmb GUI for ADMB |
| alisp | Get/Put Objects From/To Temporary Work Environment |
| appendLog | Append Data to Log File |
| atcall | Get/Put Objects From/To Temporary Work Environment |
| atget | Get/Put Objects From/To Temporary Work Environment |
| atprint | Get/Put Objects From/To Temporary Work Environment |
| atput | Get/Put Objects From/To Temporary Work Environment |
| checkADopts | Check ADMB Options for Path Integrity |
| cleanAD | Clean ADMB-Generated Files from the Working Directory |
| compAD | Compile C Code |
| convAD | Convert TPL Code to CPP Code |
| convOS | Convert Text Files to Default OS Format |
| copyFiles | Copy System Files |
| editAD | Edit ADMB Files |
| editADfile | Edit an ADMB File |
| linkAD | Link Object Files to Make an Executable |
| makeAD | Make an Executable Binary File from a C File |
| PBSadmb | PBS ADMB Package |
| plotMC | Plot Results of MCMC Simulation |
| readADopts | Read an ADMB Options List into Memory From a File |
| readADpaths | Read ADMB Paths From a Text File |
| readRep | Read an ADMB Report into R Memory |
| runAD | Run an Executable Binary File |
| runMC | Run an Executable Binary File in MCMC Mode |
| saveADpaths | Read ADMB Paths From a Text File |
| setADpath | Create ADMB Options List |
| setADver | Create ADMB Options List |
| setupAD | Set Up Paths for PBSadmb |
| showADargs | Show All Arguments for an ADMB Executable |
| startLog | Start a Log File |
| suggestPath | Suggest a Path to a Specified Program |
| writeADopts | Writes the ADMB Options List from Memory to a File |