Statistical Tools for Filebacked Big Matrices

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Documentation for package ‘bigstatsr’ version 1.6.1

• DESCRIPTION file.
• Package NEWS.

Help Pages

%*%-method	Product with a matrix
add_code256	Class FBM.code256
asPlotlyText	Plotly text
as_FBM	Class FBM
as_scaling_fun	Scaling function creator
AUC	AUC
AUCBoot	AUC
big_apply	Split-Apply-Combine
big_colstats	Standard univariate statistics
big_copy	Copy as a Filebacked Big Matrix
big_cor	Correlation
big_counts	Counts for class FBM.code256
big_cprodMat	Cross-product with a matrix
big_cprodVec	Cross-product with a vector
big_crossprodSelf	Crossprod
big_increment	Increment an FBM
big_parallelize	Split-parApply-Combine
big_prodMat	Product with a matrix
big_prodVec	Product with a vector
big_randomSVD	Randomized partial SVD
big_read	Read a file as FBM
big_scale	Some scaling functions
big_spLinReg	Sparse linear regression
big_spLogReg	Sparse logistic regression
big_SVD	Partial SVD
big_tcrossprodSelf	Tcrossprod
big_transpose	Transpose an FBM
big_univLinReg	Column-wise linear regression
big_univLogReg	Column-wise logistic regression
big_write	Write an FBM to a file
block_size	Determine a correct value for the block.size parameter
covar_from_df	Numeric matrix from data frame
crossprod-method	Cross-product with a matrix
crossprod-method	Crossprod
diag-method	Methods for the FBM class
dim-method	Methods for the FBM class
FBM	Class FBM
FBM-class	Class FBM
FBM-methods	Methods for the FBM class
FBM.code256	Class FBM.code256
FBM.code256-class	Class FBM.code256
FBM.code256_RC	Class FBM.code256
FBM_RC	Class FBM
get_beta	Combine sets of coefficients
length-method	Methods for the FBM class
pasteLoc	Get coordinates on plot
pcor	Partial correlation
plot.big_sp_list	Plot method
plot.big_SVD	Plot method
plot.mhtest	Plot method
predict.big_sp	Predict method
predict.big_sp_list	Predict method
predict.big_SVD	Scores of PCA
predict.mhtest	Predict method
sub_bk	Replace extension '.bk'
summary.big_sp_list	Summary method
tcrossprod-method	Cross-product with a matrix
tcrossprod-method	Tcrossprod
theme_bigstatsr	Theme ggplot2
typeof-method	Methods for the FBM class
without_downcast_warning	Temporarily disable downcast warning
[-method	Methods for the FBM class
[<--method	Methods for the FBM class