It is designed as an integrated package for genetic data analysis of both population and family data. Currently, it contains functions for sample size calculations of both population-based and family-based designs, classic twin models, probability of familial disease aggregation, kinship calculation, some statistics in linkage analysis, and association analysis involving one or more genetic markers including haplotype analysis with or without environmental covariates.
| Version: | 1.0-23 |
| Depends: | R (≥ 2.0.0) |
| Suggests: | BradleyTerry2, Design, Hmisc, MASS, haplo.stats, magic, pedigree, survival |
| Published: | 2010-06-25 |
| Author: | Jing Hua Zhao and colleagues with inputs from Kurt Hornik and Brian Ripley |
| Maintainer: | Jing Hua Zhao <jinghua.zhao at mrc-epid.cam.ac.uk> |
| License: | GPL (≥ 2) |
| URL: | http://www.mrc-epid.cam.ac.uk/~jinghua.zhao |
| In views: | Genetics |
| CRAN checks: | gap results |
| Package source: | gap_1.0-23.tar.gz |
| MacOS X binary: | gap_1.0-23.tgz |
| Windows binary: | gap_1.0-23.zip |
| Reference manual: | gap.pdf |
| Vignettes: |
An overview of gap |
| News/ChangeLog: | ChangeLog |
| Old sources: | gap archive |
| Reverse depends: | snpXpert |