x <- array(list(NA ,NA ,38.6 ,6654000 ,5712000 ,645.0 ,3 ,5 ,3 ,6.3 ,2.0 ,4.5 ,1000 ,6600 ,42.0 ,3 ,1 ,3 ,NA ,NA ,14.0 ,3385 ,44500 ,60.0 ,1 ,1 ,1 ,NA ,NA ,NA ,0.920 ,5700 ,25.0 ,5 ,2 ,3 ,2.1 ,1.8 ,69.0 ,2547000 ,4603000 ,624.0 ,3 ,5 ,4 ,9.1 ,0.7 ,27.0 ,10550 ,179500 ,180.0 ,4 ,4 ,4 ,15.8 ,3.9 ,19.0 ,0.023 ,0.300 ,35.0 ,1 ,1 ,1 ,5.2 ,1.0 ,30.4 ,160000 ,169000 ,392.0 ,4 ,5 ,4 ,10.9 ,3.6 ,28.0 ,3300 ,25600 ,63.0 ,1 ,2 ,1 ,8.3 ,1.4 ,50.0 ,52160 ,440000 ,230.0 ,1 ,1 ,1 ,11.0 ,1.5 ,7.0 ,0.425 ,6400 ,112.0 ,5 ,4 ,4 ,3.2 ,0.7 ,30.0 ,465000 ,423000 ,281.0 ,5 ,5 ,5 ,7.6 ,2.7 ,NA ,0.550 ,2400 ,NA ,2 ,1 ,2 ,NA ,NA ,40.0 ,187100 ,419000 ,365.0 ,5 ,5 ,5 ,6.3 ,2.1 ,3.5 ,0.075 ,1200 ,42.0 ,1 ,1 ,1 ,8.6 ,0.0 ,50.0 ,3000 ,25000 ,28.0 ,2 ,2 ,2 ,6.6 ,4.1 ,6.0 ,0.785 ,3500 ,42.0 ,2 ,2 ,2 ,9.5 ,1.2 ,10.4 ,0.200 ,5000 ,120.0 ,2 ,2 ,2 ,4.8 ,1.3 ,34.0 ,1410 ,17500 ,NA ,1 ,2 ,1 ,12.0 ,6.1 ,7.0 ,60000 ,81000 ,NA ,1 ,1 ,1 ,NA ,0.3 ,28.0 ,529000 ,680000 ,400.0 ,5 ,5 ,5 ,3.3 ,0.5 ,20.0 ,27660 ,115000 ,148.0 ,5 ,5 ,5 ,11.0 ,3.4 ,3.9 ,0.120 ,1000 ,16.0 ,3 ,1 ,2 ,NA ,NA ,39.3 ,207000 ,406000 ,252.0 ,1 ,4 ,1 ,4.7 ,1.5 ,41.0 ,85000 ,325000 ,310.0 ,1 ,3 ,1 ,NA ,NA ,16.2 ,36330 ,119500 ,63.0 ,1 ,1 ,1 ,10.4 ,3.4 ,9.0 ,0.101 ,4000 ,28.0 ,5 ,1 ,3 ,7.4 ,0.8 ,7.6 ,1040 ,5500 ,68.0 ,5 ,3 ,4 ,2.1 ,0.8 ,46.0 ,521000 ,655000 ,336.0 ,5 ,5 ,5 ,NA ,NA ,22.4 ,100000 ,157000 ,100.0 ,1 ,1 ,1 ,NA ,NA ,16.3 ,35000 ,56000 ,33.0 ,3 ,5 ,4 ,7.7 ,1.4 ,2.6 ,0.005 ,0.140 ,21.5 ,5 ,2 ,4 ,17.9 ,2.0 ,24.0 ,0.010 ,0.250 ,50.0 ,1 ,1 ,1 ,6.1 ,1.9 ,100.0 ,62000 ,1320000 ,267.0 ,1 ,1 ,1 ,8.2 ,2.4 ,NA ,0.122 ,3000 ,30.0 ,2 ,1 ,1 ,8.4 ,2.8 ,NA ,1350 ,8100 ,45.0 ,3 ,1 ,3 ,11.9 ,1.3 ,3.2 ,0.023 ,0.400 ,19.0 ,4 ,1 ,3 ,10.8 ,2.0 ,2.0 ,0.048 ,0.330 ,30.0 ,4 ,1 ,3 ,13.8 ,5.6 ,5.0 ,1700 ,6300 ,12.0 ,2 ,1 ,1 ,14.3 ,3.1 ,6.5 ,3500 ,10800 ,120.0 ,2 ,1 ,1 ,NA ,1.0 ,23.6 ,250000 ,490000 ,440.0 ,5 ,5 ,5 ,15.2 ,1.8 ,12.0 ,0.480 ,15500 ,140.0 ,2 ,2 ,2 ,10.0 ,0.9 ,20.2 ,10000 ,115000 ,170.0 ,4 ,4 ,4 ,11.9 ,1.8 ,13.0 ,1620 ,11400 ,17.0 ,2 ,1 ,2 ,6.5 ,1.9 ,27.0 ,192000 ,180000 ,115.0 ,4 ,4 ,4 ,7.5 ,0.9 ,18.0 ,2500 ,12100 ,31.0 ,5 ,5 ,5 ,NA ,NA ,13.7 ,4288 ,39200 ,63.0 ,2 ,2 ,2 ,10.6 ,2.6 ,4.7 ,0.280 ,1900 ,21.0 ,3 ,1 ,3 ,7.4 ,2.4 ,9.8 ,4235 ,50400 ,52.0 ,1 ,1 ,1 ,8.4 ,1.2 ,29.0 ,6800 ,179000 ,164.0 ,2 ,3 ,2 ,5.7 ,0.9 ,7.0 ,0.750 ,12300 ,225.0 ,2 ,2 ,2 ,4.9 ,0.5 ,6.0 ,3600 ,21000 ,225.0 ,3 ,2 ,3 ,NA ,NA ,17.0 ,14830 ,98200 ,150.0 ,5 ,5 ,5 ,3.2 ,0.6 ,20.0 ,55500 ,175000 ,151.0 ,5 ,5 ,5 ,NA ,NA ,12.7 ,1400 ,12500 ,90.0 ,2 ,2 ,2 ,8.1 ,2.2 ,3.5 ,0.060 ,1000 ,NA ,3 ,1 ,2 ,11.0 ,2.3 ,4.5 ,0.900 ,2600 ,60.0 ,2 ,1 ,2 ,4.9 ,0.5 ,7.5 ,2000 ,12300 ,200.0 ,3 ,1 ,3 ,13.2 ,2.6 ,2.3 ,0.104 ,2500 ,46.0 ,3 ,2 ,2 ,9.7 ,0.6 ,24.0 ,4190 ,58000 ,210.0 ,4 ,3 ,4 ,12.8 ,6.6 ,3.0 ,3500 ,3900 ,14.0 ,2 ,1 ,1 ,NA ,NA ,13.0 ,4050 ,17000 ,38.0 ,3 ,1 ,1) ,dim=c(9 ,62) ,dimnames=list(c('SWS' ,'PS' ,'L' ,'Wb' ,'Wbr' ,'tg' ,'P' ,'S' ,'D') ,1:62)) y <- array(NA,dim=c(9,62),dimnames=list(c('SWS','PS','L','Wb','Wbr','tg','P','S','D'),1:62)) for (i in 1:dim(x)[1]) { for (j in 1:dim(x)[2]) { y[i,j] <- as.numeric(x[i,j]) } } par1 = 'kendall' main = 'Correlation Matrix' #'GNU S' R Code compiled by R2WASP v. 1.0.44 () #Author: Dr. Ian E. Holliday #To cite this work: Ian E. Holliday, 2009, YOUR SOFTWARE TITLE (vNUMBER) in Free Statistics Software (v$_version), Office for Research Development and Education, URL http://www.wessa.net/rwasp_YOURPAGE.wasp/ #Source of accompanying publication: #Technical description: panel.tau <- function(x, y, digits=2, prefix='', cex.cor) { usr <- par('usr'); on.exit(par(usr)) par(usr = c(0, 1, 0, 1)) rr <- cor.test(x, y, method=par1) r <- round(rr$p.value,2) txt <- format(c(r, 0.123456789), digits=digits)[1] txt <- paste(prefix, txt, sep='') if(missing(cex.cor)) cex <- 0.5/strwidth(txt) text(0.5, 0.5, txt, cex = cex) } panel.hist <- function(x, ...) { usr <- par('usr'); on.exit(par(usr)) par(usr = c(usr[1:2], 0, 1.5) ) h <- hist(x, plot = FALSE) breaks <- h$breaks; nB <- length(breaks) y <- h$counts; y <- y/max(y) rect(breaks[-nB], 0, breaks[-1], y, col='grey', ...) } postscript(file="/var/www/html/rcomp/tmp/11dsj1292157947.ps",horizontal=F,onefile=F,pagecentre=F,paper="special",width=8.3333333333333,height=5.5555555555556) pairs(t(y),diag.panel=panel.hist, upper.panel=panel.smooth, lower.panel=panel.tau, main=main) dev.off() #Note: the /var/www/html/rcomp/createtable file can be downloaded at http://www.wessa.net/cretab load(file="/var/www/html/rcomp/createtable") n <- length(y[,1]) n a<-table.start() a<-table.row.start(a) a<-table.element(a,paste('Correlations for all pairs of data series (method=',par1,')',sep=''),n+1,TRUE) a<-table.row.end(a) a<-table.row.start(a) a<-table.element(a,' ',header=TRUE) for (i in 1:n) { a<-table.element(a,dimnames(t(x))[[2]][i],header=TRUE) } a<-table.row.end(a) for (i in 1:n) { a<-table.row.start(a) a<-table.element(a,dimnames(t(x))[[2]][i],header=TRUE) for (j in 1:n) { r <- cor.test(y[i,],y[j,],method=par1) a<-table.element(a,round(r$estimate,3)) } a<-table.row.end(a) } a<-table.end(a) table.save(a,file="/var/www/html/rcomp/tmp/2nv9p1292157947.tab") a<-table.start() a<-table.row.start(a) a<-table.element(a,'Correlations for all pairs of data series with p-values',4,TRUE) a<-table.row.end(a) a<-table.row.start(a) a<-table.element(a,'pair',1,TRUE) a<-table.element(a,'Pearson r',1,TRUE) a<-table.element(a,'Spearman rho',1,TRUE) a<-table.element(a,'Kendall tau',1,TRUE) a<-table.row.end(a) cor.test(y[1,],y[2,],method=par1) for (i in 1:(n-1)) { for (j in (i+1):n) { a<-table.row.start(a) dum <- paste(dimnames(t(x))[[2]][i],';',dimnames(t(x))[[2]][j],sep='') a<-table.element(a,dum,header=TRUE) rp <- cor.test(y[i,],y[j,],method='pearson') a<-table.element(a,round(rp$estimate,4)) rs <- cor.test(y[i,],y[j,],method='spearman') a<-table.element(a,round(rs$estimate,4)) rk <- cor.test(y[i,],y[j,],method='kendall') a<-table.element(a,round(rk$estimate,4)) a<-table.row.end(a) a<-table.row.start(a) a<-table.element(a,'p-value',header=T) a<-table.element(a,paste('(',round(rp$p.value,4),')',sep='')) a<-table.element(a,paste('(',round(rs$p.value,4),')',sep='')) a<-table.element(a,paste('(',round(rk$p.value,4),')',sep='')) a<-table.row.end(a) } } a<-table.end(a) table.save(a,file="/var/www/html/rcomp/tmp/315oy1292157947.tab") try(system("convert tmp/11dsj1292157947.ps tmp/11dsj1292157947.png",intern=TRUE))